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Genomics Reveals the Origins of Historical Specimens
Qian Cong, Jinhui Shen, Jing Zhang, Wenlin Li, Lisa N Kinch, John V Calhoun, Andrew D Warren, Nick V Grishin
Publication Date:
Article Pages: 10 Open access contents
Inferring Adaptive Introgression Using Hidden Markov Models
Jesper Svedberg, Vladimir Shchur, Solomon Reinman, Rasmus Nielsen, Russell Corbett-Detig
Publication Date:
Article Pages: 13 Open access contents
Fast and Robust Identity-by-Descent Inference with the Templated Positional Burrows–Wheeler Transform
William A Freyman, Kimberly F McManus, Suyash S Shringarpure, Ethan M Jewett, Katarzyna Bryc, Adam Auton
Publication Date:
Article Pages: 20 Open access contents
Rampant False Detection of Adaptive Phenotypic Optimization by ParTI-Based Pareto Front Inference
Mengyi Sun, Jianzhi Zhang
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Article Pages: 11 Open access contents
A Spatially Explicit Model of Stabilizing Selection for Improving Phylogenetic Inference
Jeremy M Beaulieu, Brian C O’Meara, Michael A Gilchrist
Publication Date:
Article Pages: 11 Open access contents
Properties of Markov Chain Monte Carlo Performance across Many Empirical Alignments
Sean M Harrington, Van Wishingrad, Robert C Thomson
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Article Pages: 13 Open access contents
Special Care Is Needed in Applying Phylogenetic Comparative Methods to Gene Trees with Speciation and Duplication Nodes
Tina Begum, Marc Robinson-Rechavi
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Article Pages: 12 Open access contents
Contrast-FEL—A Test for Differences in Selective Pressures at Individual Sites among Clades and Sets of Branches
Sergei L Kosakovsky Pond, Sadie R Wisotsky, Ananias Escalante, Brittany Rife Magalis, Steven Weaver
Publication Date:
Article Pages: 14 Open access contents
Learning Retention Mechanisms and Evolutionary Parameters of Duplicate Genes from Their Expression Data
Michael DeGiorgio, Raquel Assis
Publication Date:
Article Pages: 15 Open access contents
A Bayesian Mutation–Selection Framework for Detecting Site-Specific Adaptive Evolution in Protein-Coding Genes
Nicolas Rodrigue, Thibault Latrille, Nicolas Lartillot
Publication Date:
Article Pages: 9 Open access contents