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        <title>Nova Reader - Subject</title>
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        <copyright>Newgen KnowledgeWorks</copyright>
        <item>
            <title><![CDATA[Pharmacogenetics of novel glucose-lowering drugs]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766078818030-2293f31b-f3f5-49bb-955d-92876220cdfe/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1007/s00125-021-05402-w</link>
            <description><![CDATA[<p class="para" id="Par1">The aim of this work was to review studies in which genetic variants were assessed with respect to metabolic response to treatment with novel glucose-lowering drugs: dipeptidyl peptidase-4 inhibitors (DPP-4i), glucagon-like peptide-1 receptor agonists (GLP-1 RA) and sodium–glucose cotransporter 2 inhibitors (SGLT2i). In total, 22 studies were retrieved from the literature (MEDLINE). Variants of the GLP-1 receptor gene (<i>GLP1R</i>) were associated with a smaller reduction in HbA<sub>1c</sub> in response to DPP-4i. Variants of a number of other genes (<i>KCNQ1</i>, <i>KCNJ11</i>, <i>CTRB1/2</i>, <i>PRKD1</i>, <i>CDKAL1</i>, <i>IL6</i> promoter region, <i>TCF7L2</i>, <i>DPP4</i>, <i>PNPLA3</i>) have also been related to DPP-4i response, although replication studies are lacking. The <i>GLP1R</i> gene was also reported to play a role in the response to GLP-1 RA, with larger weight reductions being reported in carriers of <i>GLP1R</i> variant alleles. There were variants of a few other genes (<i>CNR1</i>, <i>TCF7L2</i>, <i>SORCS1</i>) described to be related to GLP-1 RA. For SGLT2i, studies have focused on genes affecting renal glucose reabsorption (e.g. <i>SLC5A2</i>) but no relationship between <i>SLC5A2</i> variants and response to empagliflozin has been found. The relevance of the included studies is limited due to small genetic effects, low sample sizes, limited statistical power, inadequate statistics (lack of gene–drug interactions), inadequate accounting for confounders and effects modifiers, and a lack of replication studies. Most studies have been based on candidate genes. Genome-wide association studies, in that respect, may be a more promising approach to providing novel insights. However, the identification of distinct subgroups of type 2 diabetes might also be necessary before pharmacogenetic studies can be successfully used for a stratified prescription of novel glucose-lowering drugs.</p><p class="para" id="Par2"><div class="imageVideo"><img src="/dataresources/secured/content-1766078818030-2293f31b-f3f5-49bb-955d-92876220cdfe/assets/125_2021_5402_Figa_HTML.jpg" alt=""/></div></p><div class="section" id="N65605"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65608">The online version of this article (10.1007/s00125-021-05402-w) contains peer-reviewed but unedited supplementary material..</p></div>]]></description>
            <pubDate><![CDATA[2021-02-16T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[miR‐33 in cardiometabolic diseases: lessons learned from novel animal models and approaches]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766073640921-65f6a369-e5e2-4720-b7c8-d7241e74e61e/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202012606</link>
            <description><![CDATA[<p class="para" id="N65542">miRNAs have emerged as critical regulators of nearly all biologic processes and important therapeutic targets for numerous diseases. However, despite the tremendous progress that has been made in this field, many misconceptions remain among much of the broader scientific community about the manner in which miRNAs function. In this review, we focus on miR‐33, one of the most extensively studied miRNAs, as an example, to highlight many of the advances that have been made in the miRNA field and the hurdles that must be cleared to promote the development of miRNA‐based therapies. We discuss how the generation of novel animal models and newly developed experimental techniques helped to elucidate the specialized roles of miR‐33 within different tissues and begin to define the specific mechanisms by which miR‐33 contributes to cardiometabolic diseases including obesity and atherosclerosis. This review will summarize what is known about miR‐33 and highlight common obstacles in the miRNA field and then describe recent advances and approaches that have allowed researchers to provide a more complete picture of the specific functions of this miRNA.</p><p class="para" id="N65541">miRNAs have emerged as critical regulators of biologic processes and important therapeutic targets for numerous diseases. This review focusses on miR‐33 as an example, and describes the obstacles, recent advances and new approaches in the miRNA field.<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1766073640921-65f6a369-e5e2-4720-b7c8-d7241e74e61e/assets/EMMM-13-e12606-g001.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-05-03T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[miR‐33 in cardiometabolic diseases: lessons learned from novel animal models and approaches]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766073640921-65f6a369-e5e2-4720-b7c8-d7241e74e61e/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202012606</link>
            <description><![CDATA[<p class="para" id="N65542">miRNAs have emerged as critical regulators of nearly all biologic processes and important therapeutic targets for numerous diseases. However, despite the tremendous progress that has been made in this field, many misconceptions remain among much of the broader scientific community about the manner in which miRNAs function. In this review, we focus on miR‐33, one of the most extensively studied miRNAs, as an example, to highlight many of the advances that have been made in the miRNA field and the hurdles that must be cleared to promote the development of miRNA‐based therapies. We discuss how the generation of novel animal models and newly developed experimental techniques helped to elucidate the specialized roles of miR‐33 within different tissues and begin to define the specific mechanisms by which miR‐33 contributes to cardiometabolic diseases including obesity and atherosclerosis. This review will summarize what is known about miR‐33 and highlight common obstacles in the miRNA field and then describe recent advances and approaches that have allowed researchers to provide a more complete picture of the specific functions of this miRNA.</p><p class="para" id="N65541">miRNAs have emerged as critical regulators of biologic processes and important therapeutic targets for numerous diseases. This review focusses on miR‐33 as an example, and describes the obstacles, recent advances and new approaches in the miRNA field.<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1766073640921-65f6a369-e5e2-4720-b7c8-d7241e74e61e/assets/EMMM-13-e12606-g001.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-05-03T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Actives from MMV Open Access Boxes? A suggested way forward]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766063521680-465d7819-2708-41d1-956d-910e72a5a277/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009384</link>
            <description><![CDATA[<p class="para" id="N65539">It is estimated that more than 1 billion people across the world are affected by a neglected tropical disease (NTD) that requires medical intervention. These diseases tend to afflict people in areas with high rates of poverty and cost economies billions of dollars every year. Collaborative drug discovery efforts are required to reduce the burden of these diseases in endemic regions. The release of “Open Access Boxes” is an initiative launched by Medicines for Malaria Venture (MMV) in collaboration with its partners to catalyze new drug discovery in neglected diseases. These boxes are mainly requested by biology researchers across the globe who may not otherwise have access to compounds to screen nor knowledge of the workflow that needs to be followed after identification of actives from their screening campaigns. Here, we present guidelines on how to move such actives beyond the hit identification stage, to help in capacity strengthening and enable a greater impact of the initiative.</p>]]></description>
            <pubDate><![CDATA[2021-04-22T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The application of spectroscopy techniques for diagnosis of malaria parasites and arboviruses and surveillance of mosquito vectors: A systematic review and critical appraisal of evidence]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766062074972-f91e89c9-c463-4f38-bd94-a6d16a0a0b3d/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0009218</link>
            <description><![CDATA[<p class="para" id="N65539">Spectroscopy-based techniques are emerging diagnostic and surveillance tools for mosquito-borne diseases. This review has consolidated and summarised recent research in the application of Raman and infrared spectroscopy techniques including near- and mid-infrared spectroscopy for malaria and arboviruses, identified knowledge gaps, and recommended future research directions. Full-length peer<b>-</b>reviewed journal articles related to the application of Raman and infrared (near- and mid-infrared) spectroscopy for malaria and arboviruses were systematically searched in PUBMED, MEDILINE, and Web of Science databases using the PRISMA guidelines. In text review of identified studies included the methodology of spectroscopy technique used, data analysis applied, wavelengths used, and key findings for diagnosis of malaria and arboviruses and surveillance of mosquito vectors. A total of 58 studies met the inclusion criteria for our systematic literature search. Although there was an increased application of Raman and infrared spectroscopy-based techniques in the last 10 years, our review indicates that Raman spectroscopy (RS) technique has been applied exclusively for the diagnosis of malaria and arboviruses. The mid-infrared spectroscopy (MIRS) technique has been assessed for the diagnosis of malaria parasites in human blood and as a surveillance tool for malaria vectors, whereas the near-infrared spectroscopy (NIRS) technique has almost exclusively been applied as a surveillance tool for malaria and arbovirus vectors.</p><div class="section" id="sec001"><h3 class="BHead" id="nov000-1">Conclusions/Significance</h3><p class="para" id="N65548">The potential of RS as a surveillance tool for malaria and arbovirus vectors and MIRS for the diagnosis and surveillance of arboviruses is yet to be assessed. NIRS capacity as a surveillance tool for malaria and arbovirus vectors should be validated under field conditions, and its potential as a diagnostic tool for malaria and arboviruses needs to be evaluated. It is recommended that all 3 techniques evaluated simultaneously using multiple machine learning techniques in multiple epidemiological settings to determine the most accurate technique for each application. Prior to their field application, a standardised protocol for spectra collection and data analysis should be developed. This will harmonise their application in multiple field settings allowing easy and faster integration into existing disease control platforms. Ultimately, development of rapid and cost-effective point-of-care diagnostic tools for malaria and arboviruses based on spectroscopy techniques may help combat current and future outbreaks of these infectious diseases.</p></div><p class="para" id="N65542">Malaria and many arboviruses such as Dengue virus, Zika virus, Chikungunya virus, and Ross River virus are persistent and detrimental to the global population. Rapid and accurate diagnosis of these infections in human populations and mosquito vectors is essential for understanding their epidemiology, for prompt treatment, and to improve and guide control and elimination strategies. Raman and infrared spectroscopy are rapid and cost-effective tools that have shown potential as diagnostic and surveillance tools for malaria and arboviruses. This systematic review presents up-to-date research conducted using RS, MIRS, and NIRS for the diagnosis of malaria parasite and arboviruses as well as for the surveillance of malaria and arbovirus vectors.</p>]]></description>
            <pubDate><![CDATA[2021-04-22T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Some conditions apply: Systems for studying <i>Plasmodium falciparum</i> protein function]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766061710455-3658d8d9-51d3-462e-a1fb-b2db5b937752/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009442</link>
            <description><![CDATA[<p class="para" id="N65539">Malaria, caused by infection with <i>Plasmodium</i> parasites, remains a significant global health concern. For decades, genetic intractability and limited tools hindered our ability to study essential proteins and pathways in <i>Plasmodium falciparum</i>, the parasite associated with the most severe malaria cases. However, recent years have seen major leaps forward in the ability to genetically manipulate <i>P</i>. <i>falciparum</i> parasites and conditionally control protein expression/function. The conditional knockdown systems used in <i>P</i>. <i>falciparum</i> target all 3 components of the central dogma, allowing researchers to conditionally control gene expression, translation, and protein function. Here, we review some of the common knockdown systems that have been adapted or developed for use in <i>P</i>. <i>falciparum</i>. Much of the work done using conditional knockdown approaches has been performed in asexual, blood-stage parasites, but we also highlight their uses in other parts of the life cycle and discuss new ways of applying these systems outside of the intraerythrocytic stages. With the use of these tools, the field’s understanding of parasite biology is ever increasing, and promising new pathways for antimalarial drug development are being discovered.</p>]]></description>
            <pubDate><![CDATA[2021-04-22T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Mitophagy pathways in health and disease]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766056421273-0c688864-c0a6-4ceb-9816-b9ef35433e2d/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1083/jcb.202004029</link>
            <description><![CDATA[<p class="para" id="N65540">Killackey et al. review recent advances and major questions in the field of mitophagy, as well as implications for mitophagy in disease.</p><p class="para" id="N65539">Mitophagy is an evolutionarily conserved process involving the autophagic targeting and clearance of mitochondria destined for removal. Recent insights into the complex nature of the overlapping pathways regulating mitophagy illustrate mitophagy’s essential role in maintaining the health of the mitochondrial network. In this review, we highlight recent studies that have changed the way mitophagy is understood, from initiation through lysosomal degradation. We outline the numerous mitophagic receptors and triggers, with a focus on basal and physiologically relevant cues, offering insight into why they lead to mitochondrial removal. We also explore how mitophagy maintains mitochondrial homeostasis at the organ and system levels and how a loss of mitophagy may play a role in a diverse group of diseases, including cardiovascular, metabolic, and neurodegenerative diseases. With disrupted mitophagy affecting such a wide array of physiological processes, a deeper understanding of how to modulate mitophagy could provide avenues for numerous therapies.</p>]]></description>
            <pubDate><![CDATA[2020-09-14T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Keeping track of time: The fundamentals of cellular clocks]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766056352662-c1944435-3425-4db2-8e2d-c7356c65c1ac/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1083/jcb.202005136</link>
            <description><![CDATA[<p class="para" id="N65540">Gliech and Holland discuss the guiding design principles of biological clocks across a variety of model systems.</p><p class="para" id="N65539">Biological timekeeping enables the coordination and execution of complex cellular processes such as developmental programs, day/night organismal changes, intercellular signaling, and proliferative safeguards. While these systems are often considered separately owing to a wide variety of mechanisms, time frames, and outputs, all clocks are built by calibrating or delaying the rate of biochemical reactions and processes. In this review, we explore the common themes and core design principles of cellular clocks, giving special consideration to the challenges associated with building timers from biochemical components. We also outline how evolution has coopted time to increase the reliability of a diverse range of biological systems.</p>]]></description>
            <pubDate><![CDATA[2020-09-09T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Microbiome-immune interactions in tuberculosis]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766045676942-49e6c61e-4854-453d-b25d-ff2546c83a29/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009377</link>
            <description><![CDATA[<p class="para" id="N65539">Tuberculosis (TB) remains an infectious disease of global significance and a
leading cause of death in low- and middle-income countries. Significant effort
has been directed towards understanding <i>Mycobacterium
tuberculosis</i> genomics, virulence, and pathophysiology within the
framework of Koch postulates. More recently, the advent of “-omics” approaches
has broadened our appreciation of how “commensal” microbes have coevolved with
their host and have a central role in shaping health and susceptibility to
disease. It is now clear that there is a diverse repertoire of interactions
between the microbiota and host immune responses that can either sustain or
disrupt homeostasis. In the context of the global efforts to combatting TB, such
findings and knowledge have raised important questions: Does microbiome
composition indicate or determine susceptibility or resistance to
<i>M</i>. <i>tuberculosis</i> infection? Is the
development of active disease or latent infection upon <i>M</i>.
<i>tuberculosis</i> exposure influenced by the microbiome? Does
microbiome composition influence TB therapy outcome and risk of reinfection with
<i>M</i>. <i>tuberculosis</i>? Can the microbiome be
actively managed to reduce risk of <i>M</i>.
<i>tuberculosis</i> infection or recurrence of TB? Here, we
explore these questions with a particular focus on microbiome-immune
interactions that may affect TB susceptibility, manifestation and progression,
the long-term implications of anti-TB therapy, as well as the potential of the
host microbiome as target for clinical manipulation.</p>]]></description>
            <pubDate><![CDATA[2021-04-15T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[COVID-19 discarded disposable gloves as a source and a vector of pollutants in the environment]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766041817317-bfea22f0-dc67-440b-94d7-08af1a1448fa/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.jhazmat.2021.125938</link>
            <description><![CDATA[<p class="para" id="N65540">The appearance of the virus SARS-CoV-2 at the end of 2019 and its spreading all over the world has caused global panic and increase of personal protection equipment usage to protect people against infection. Increased usage of disposable protective gloves, their discarding to random spots and getting to landfills may result in significant environmental pollution. The knowledge concerning possible influence of gloves and potential of gloves debris on the environment (water, soil, etc.), wildlife and humans is crucial to predict future consequences of disposable gloves usage caused by the pandemic. This review focuses on the possibility of chemical release (heavy metals and organic pollutants) from gloves and gloves materials, their adsorptive properties in terms of contaminants accumulation and effects of gloves degradation under environmental conditions.</p><p class="para" id="N65543"><div class="section" id="fig0035"><div class="img"><div class="imgeVideo"><div class="img-fullscreenIcon" onClick="javascript:showImageContent('fig0035');"><img src="/public/images/journalImg/fullscreen.png"/></div><div class="imageVideo"><img src="/dataresources/secured/content-1766041817317-bfea22f0-dc67-440b-94d7-08af1a1448fa/assets/ga1_lrg.jpg" alt=""/></div></div></div></div></p>]]></description>
            <pubDate><![CDATA[2021-04-27T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Lipid homeostasis and mevalonate pathway in COVID-19: Basic concepts and potential therapeutic targets]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766040002426-b0e15e54-8869-4059-97a1-9dae99bf1f5f/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.plipres.2021.101099</link>
            <description><![CDATA[<p class="para" id="N65540">Despite encouraging progresses achieved in the management of viral diseases, efficient strategies to counteract infections are still required. The current global challenge highlighted the need to develop a rapid and cost-effective strategy to counteract the SARS-CoV-2 pandemic.</p><p class="para" id="N65542">Lipid metabolism plays a crucial role in viral infections. Viruses can use the host lipid machinery to support their life cycle and to impair the host immune response. The altered expression of mevalonate pathway-related genes, induced by several viruses, assures survival and spread in host tissue. In some infections, statins, HMG-CoA-reductase inhibitors, reduce cholesterol in the plasma membrane of permissive cells resulting in lower viral titers and failure to internalize the virus. Statins can also counteract viral infections through their immunomodulatory, anti-inflammatory and anti-thrombotic effects. Beyond statins, interfering with the mevalonate pathway could have an adjuvant effect in therapies aimed at mitigating endothelial dysfunction and deregulated inflammation in viral infection.</p><p class="para" id="N65544">In this review we depicted the historical and current evidence highlighting how lipid homeostasis and mevalonate pathway targeting represents a valid approach to rapidly neutralize viruses, focusing our attention to their potential use as effective targets to hinder SARS-CoV-2 morbidity and mortality.</p><p class="para" id="N65546">Pros and cons of statins and Mevalonate-pathway inhibitors have been also dissected.</p>]]></description>
            <pubDate><![CDATA[2021-04-26T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[A catalog of GWAS fine-mapping efforts in autoimmune disease]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766038328102-1753b573-c0f4-4057-a075-59b3fe4df7f1/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.ajhg.2021.03.009</link>
            <description><![CDATA[<p class="para" id="N65542">Genome-wide association studies (GWASs) have enabled unbiased identification of genetic loci contributing to common complex diseases. Because GWAS loci often harbor many variants and genes, it remains a major challenge to move from GWASs’ statistical associations to the identification of causal variants and genes that underlie these association signals. Researchers have applied many statistical and functional fine-mapping strategies to prioritize genetic variants and genes as potential candidates. There is no gold standard in fine-mapping approaches, but consistent results across different approaches can improve confidence in the fine-mapping findings. Here, we combined text mining with a systematic review and formed a catalog of 85 studies with evidence of fine mapping for at least one autoimmune GWAS locus. Across all fine-mapping studies, we compiled 230 GWAS loci with allelic heterogeneity estimates and predictions of causal variants and trait-relevant genes. These 230 loci included 455 combinations of locus-by-disease association signals with 15 autoimmune diseases. Using these estimates, we assessed the probability of mediating disease risk associations across genes in GWAS loci and identified robust signals of causal disease biology. We predict that this comprehensive catalog of GWAS fine-mapping efforts in autoimmune disease will greatly help distill the plethora of information in the field and inform therapeutic strategies.</p><p class="para" id="N65541">Genome-wide association studies (GWASs) have enabled unbiased identification of genetic loci contributing to common complex diseases. Because GWAS loci often harbor many variants and genes, it remains a major challenge to move from GWASs’ statistical associations to the identification of causal variants and genes that underlie these association signals. Researchers have applied many statistical and functional fine-mapping strategies to prioritize genetic variants and genes as potential candidates. There is no gold standard in fine-mapping approaches, but consistent results across different approaches can improve confidence in the fine-mapping findings. Here, we combined text mining with a systematic review and formed a catalog of 85 studies with evidence of fine mapping for at least one autoimmune GWAS locus. Across all fine-mapping studies, we compiled 230 GWAS loci with allelic heterogeneity estimates and predictions of causal variants and trait-relevant genes. These 230 loci included 455 combinations of locus-by-disease association signals with 15 autoimmune diseases. Using these estimates, we assessed the probability of mediating disease risk associations across genes in GWAS loci and identified robust signals of causal disease biology. We predict that this comprehensive catalog of GWAS fine-mapping efforts in autoimmune disease will greatly help distill the plethora of information in the field and inform therapeutic strategies.</p>]]></description>
            <pubDate><![CDATA[2021-04-01T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Sublimable Spin‐Crossover Complexes: From Spin‐State Switching to Molecular Devices]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766033745920-f1b60ccd-2625-4ad9-a19f-8d9a38c09fce/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.201911256</link>
            <description><![CDATA[<p class="para" id="N65541">Spin‐crossover (SCO) active transition metal complexes are an important class of switchable molecular materials due to their bistable spin‐state switching characteristics at or around room temperature. Vacuum‐sublimable SCO complexes are a subclass of SCO complexes suitable for fabricating ultraclean spin‐switchable films desirable for applications, especially in molecular electronics/spintronics. Consequently, on‐surface SCO of thin‐films of sublimable SCO complexes have been studied employing spectroscopy and microscopy techniques, and results of fundamental and technological importance have been obtained. This Review provides complete coverage of advances made in the field of vacuum‐sublimable SCO complexes: progress made in the design and synthesis of sublimable functional SCO complexes, on‐surface SCO of molecular and multilayer thick films, and various molecular and thin‐film device architectures based on the sublimable SCO complexes.</p><p class="para" id="N65540">This review provides a <b>c</b>omplete account of the on‐surface spin‐state switching behavior of films of spin‐crossover (SCO) complexes of molecular to multilayer thickness. SCO‐based molecular and thin‐film device architectures fabricated employing vacuum sublimation are also described.<div class="section"><div class="box" id="N65545"><div class="imageVideo"><img src="/dataresources/secured/content-1766033745920-f1b60ccd-2625-4ad9-a19f-8d9a38c09fce/assets/ANIE-60-7502-g004.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-10-29T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Acid–Base Free Main Group Carbonyl Analogues]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766032893833-fef200ef-9b23-4030-8e51-d57c00d90520/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.202008174</link>
            <description><![CDATA[<p class="para" id="N65541">Main group carbonyl analogues (R<sub>2</sub>E=O) derived from p‐block elements (E=groups 13 to 15) have long been considered as elusive species. Previously, employment of chemical tricks such as acid‐ and base‐stabilization protocols granted access to these transient species in their masked forms. However, electronic and steric effects inevitably perturb their chemical reactivity and distinguish them from classical carbonyl compounds. A new era was marked by the recent isolation of acid–base free main group carbonyl analogues, ranging from a lighter boracarbonyl to the heavier silacarbonyls, phosphacarbonyls and a germacarbonyl. Most importantly, their unperturbed nature elicits exciting new chemistry, spanning the vista from classical organic carbonyl‐type reactions to transition metal‐like oxide ion transfer chemistry. In this Review, we survey the strategies used for the isolation of such systems and document their emerging reactivity profiles, with a view to providing fundamental comparisons both with carbon and transition metal oxo species. This highlights the emerging opportunities for exciting “crossover” reactivity offered by these derivatives of the p‐block elements.</p><p class="para" id="N65540">Recently, hitherto elusive acid‐ and base‐free main group carbonyl analogues (R<sub>2</sub>E=O) derived from group 13 to 15 elements have been isolated in crystalline form. Their unperturbed nature elicits exciting new chemistry, spanning the vista from classical organic carbonyl‐type reactions to transition metal‐like oxide ion transfer chemistry.<div class="section"><div class="box" id="N65545"><div class="imageVideo"><img src="/dataresources/secured/content-1766032893833-fef200ef-9b23-4030-8e51-d57c00d90520/assets/ANIE-60-8626-g034.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-10-19T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Molecular Vanadium Oxides for Energy Conversion and Energy Storage: Current Trends and Emerging Opportunities]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766030365152-73d3f0a4-d653-45de-9591-939fe7396b70/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.202010577</link>
            <description><![CDATA[<p class="para" id="N65541">Molecular vanadium oxides, or polyoxovanadates (POVs), have recently emerged as a new class of molecular energy conversion/storage materials, which combine diverse, chemically tunable redox behavior and reversible multielectron storage capabilities. This Review explores current challenges, major breakthroughs, and future opportunities in the use of POVs for energy conversion and storage. The reactivity, advantages, and limitations of POVs are explored, with a focus on their use in lithium and post‐lithium‐ion batteries, redox‐flow batteries, and light‐driven energy conversion. Finally, emerging themes and new research directions are critically assessed to provide inspiration for how this promising materials class can advance research in sustainable energy technologies.</p><p class="para" id="N65540">This Review critically discusses recent breakthroughs and future challenges in research on polyoxovanadate energy materials. The use of polyoxovanadates in batteries, redox‐flow batteries, light‐driven catalysis, and electrocatalysis is described together with an outlook on emerging themes and areas of future application.<div class="section"><div class="box" id="N65542"><div class="imageVideo"><img src="/dataresources/secured/content-1766030365152-73d3f0a4-d653-45de-9591-939fe7396b70/assets/ANIE-60-7522-g002.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-12-17T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Bilateral Pallidotomy for Dystonia: A Systematic Review]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766030315137-91d2e665-b094-4832-ab05-dd404b8ec753/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/mds.28384</link>
            <description><![CDATA[<p class="para" id="N65541">Stereotactic lesioning of the bilateral globus pallidus (GPi) was one of the first surgical treatments for medication‐refractory dystonia but has largely been abandoned in clinical practice after the introduction of deep brain stimulation (DBS). However, some patients with dystonia are not eligible for DBS. Therefore, we reviewed the efficacy, safety, and sustainability of bilateral pallidotomy by conducting a systematic review of individual patient data (IPD). Guidelines of the Preferred Reporting Items for Systematic Reviews and Meta‐Analyses and IPD were followed. In May 2020, Medline, Embase, Web of Science, and Cochrane Library were searched for studies reporting on outcome of bilateral pallidotomy for dystonia. If available, IPD were collected. In this systematic review, 100 patients from 33 articles were evaluated. Adverse events were reported in 20 patients (20%), of which 8 were permanent (8%). Pre‐and postoperative Burke‐Fahn‐Marsden Dystonia Rating Movement Scale scores were available for 53 patients. A clinically relevant improvement (&gt;20%) of this score was found in 42 of 53 patients (79%). Twenty‐five patients with status dystonicus (SD) were described. In all but 2 the SD resolved after bilateral pallidotomy. Seven patients experienced a relapse of SD. Median‐reported follow‐up was 12 months (n = 83; range: 2–180 months). Based on the current literature, bilateral pallidotomy is an effective and relatively safe procedure for certain types of dystonia, particularly in medication‐refractory SD. Although due to publication bias the underreporting of negative outcomes is very likely, bilateral pallidotomy is a reasonable alternative to DBS in selected dystonia patients. © 2020 The Authors. <i>Movement Disorders</i> published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society.</p>]]></description>
            <pubDate><![CDATA[2020-11-20T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The consequences of hypoglycaemia]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766029181337-535cb94c-9db4-455f-82f4-a15d86ba8c89/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1007/s00125-020-05366-3</link>
            <description><![CDATA[<p class="para" id="Par1">Hypoglycaemia (blood glucose concentration below the normal range) has
been recognised as a complication of insulin treatment from the very first days of
the discovery of insulin, and remains a major concern for people with diabetes,
their families and healthcare professionals today. Acute hypoglycaemia stimulates a
stress response that acts to restore circulating glucose, but plasma glucose
concentrations can still fall too low to sustain normal brain function and cardiac
rhythm. There are long-term consequences of recurrent hypoglycaemia, which are still
not fully understood. This paper reviews our current understanding of the acute and
cumulative consequences of hypoglycaemia in insulin-treated diabetes.</p><p class="para" id="Par2">
<div class="imageVideo"><img src="/dataresources/secured/content-1766029181337-535cb94c-9db4-455f-82f4-a15d86ba8c89/assets/125_2020_5366_Figa_HTML.jpg" alt=""/></div></p><div class="section" id="N65552"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65555">The online version contains a slide of the figure for download available at 10.1007/s00125-020-05366-3.</p></div>]]></description>
            <pubDate><![CDATA[2021-02-07T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Consequences of recurrent hypoglycaemia on brain function in diabetes]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766028771793-c683e9e7-36a9-4a53-aa99-9122b80a16a0/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1007/s00125-020-05369-0</link>
            <description><![CDATA[<p class="para" id="Par1">The discovery of insulin and its subsequent mass manufacture transformed the lives of people with type 1 and 2 diabetes. Insulin, however, was a drug with a ‘dark side’. It brought with it the risk of iatrogenic hypoglycaemia. In this short review, the cellular consequences of recurrent hypoglycaemia, with a particular focus on the brain, are discussed. Using the ventromedial hypothalamus as an exemplar, this review highlights how recurrent hypoglycaemia has an impact on the specialised cells in the brain that are critical to the regulation of glucose homeostasis and the counterregulatory response to hypoglycaemia. In these cells, recurrent hypoglycaemia initiates a series of adaptations that ensure that they are more resilient to subsequent hypoglycaemia, but this leads to impaired hypoglycaemia awareness and a paradoxical increased risk of severe hypoglycaemia. This review also highlights how hypoglycaemia, as an oxidative stressor, may also exacerbate chronic hyperglycaemia-induced increases in oxidative stress and inflammation, leading to damage to vulnerable brain regions (and other end organs) and accelerating cognitive decline. Pre-clinical research indicates that glucose recovery following hypoglycaemia is considered a period where reactive oxygen species generation and oxidative stress are pronounced and can exacerbate the longer-term consequence of chronic hypoglycaemia. It is proposed that prior glycaemic control, hypoglycaemia and the degree of rebound hyperglycaemia interact synergistically to accelerate oxidative stress and inflammation, which may explain why increased glycaemic variability is now increasingly considered a risk factor for the complications of diabetes.</p><p class="para" id="Par2"><div class="imageVideo"><img src="/dataresources/secured/content-1766028771793-c683e9e7-36a9-4a53-aa99-9122b80a16a0/assets/125_2020_5369_Figa_HTML.jpg" alt=""/></div></p><div class="section" id="N65551"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65554">The online version contains a slideset of the figures for download, which is available to authorised users, available at 10.1007/s00125-020-05369-0.</p></div>]]></description>
            <pubDate><![CDATA[2021-03-18T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[A global perspective on the issue of access to insulin]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766028581698-5e247234-131b-49e1-9a9d-480546d52e7b/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1007/s00125-020-05375-2</link>
            <description><![CDATA[<p class="para" id="Par1">The discovery of insulin in 1921 changed the prognosis for people with type 1 diabetes. A century later, availability and affordability of insulin remain a challenge in many parts of the globe. Using the WHO’s framework on understanding the life cycle of medicines, this review details the global and national challenges that affect patients’ abilities to access and afford insulin. Current research and development in diabetes has seen some innovations, but none of these have truly been game-changing. Currently, three multinational companies control over 95% of global insulin supply. The inclusion of insulin on the WHO’s Prequalification Programme is an opportunity to facilitate entry of new companies into the market. Many governments lack policies on the selection, procurement, supply, pricing and reimbursement of insulin. Moreover, mark-ups in the supply chain also affect the final price to the consumer. Whilst expenses related to diabetes are mostly covered by insurance in high-income countries, many patients from low- and middle-income countries have to pay out of their own pockets. The organisation of diabetes management within the healthcare system also affects patient access to insulin. The challenges affecting access to insulin are complex and require a wide range of solutions. Given that 2021 marks the centenary of the discovery of insulin, there is need for global advocacy to ensure that the benefits of insulin and innovations in diabetes care reach all individuals living with diabetes.</p><p class="para" id="Par2"><div class="imageVideo"><img src="/dataresources/secured/content-1766028581698-5e247234-131b-49e1-9a9d-480546d52e7b/assets/125_2020_5375_Figa_HTML.jpg" alt=""/></div></p><div class="section" id="N65551"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65554">The online version contains a slideset of the figures for download, which is available at 10.1007/s00125-020-05375-2.</p></div>]]></description>
            <pubDate><![CDATA[2021-01-23T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Current and future therapies for type 1 diabetes]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766028485869-181e41bd-8df5-45d5-b834-42d475098033/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1007/s00125-021-05398-3</link>
            <description><![CDATA[<p class="para" id="Par1">In type 1 diabetes, insulin remains the mature therapeutic cornerstone; yet, the increasing number of individuals developing type 1 diabetes (predominantly children and adolescents) still face severe complications. Fortunately, our understanding of type 1 diabetes is continuously being refined, allowing for refocused development of novel prevention and management strategies. Hitherto, attempts based on immune suppression and modulation have been only partly successful in preventing the key pathophysiological feature in type 1 diabetes: the immune-mediated derangement or destruction of beta cells in the pancreatic islets of Langerhans, leading to low or absent insulin secretion and chronic hyperglycaemia. Evidence now warrants a focus on the beta cell itself and how to avoid its dysfunction, which is putatively caused by cytokine-driven inflammation and other stress factors, leading to low insulin-secretory capacity, autoantigen presentation and immune-mediated destruction. Correspondingly, beta cell rescue strategies are being pursued, which include antigen vaccination using, for example, oral insulin or peptides, as well as agents with suggested benefits on beta cell stress, such as verapamil and glucagon-like peptide-1 receptor agonists. Whilst autoimmune-focused prevention approaches are central in type 1 diabetes and will be a requirement in the advent of stem cell-based replacement therapies, managing the primarily cardiometabolic complications of established type 1 diabetes is equally essential. In this review, we outline selected recent and suggested future attempts to address the evolving profile of the person with type 1 diabetes.</p><p class="para" id="Par2"><div class="imageVideo"><img src="/dataresources/secured/content-1766028485869-181e41bd-8df5-45d5-b834-42d475098033/assets/125_2021_5398_Figa_HTML.jpg" alt=""/></div></p><div class="section" id="N65551"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65554">The online version contains a slide of the figure for download available at 10.1007/s00125-021-05398-3.</p></div>]]></description>
            <pubDate><![CDATA[2021-02-17T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[New closed-loop insulin systems]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766028464431-2628c69e-2ada-4e7a-a534-b8e9b01d2749/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1007/s00125-021-05391-w</link>
            <description><![CDATA[<p class="para" id="Par1">Advances in diabetes technologies have enabled the development of automated closed-loop insulin delivery systems. Several hybrid closed-loop systems have been commercialised, reflecting rapid transition of this evolving technology from research into clinical practice, where it is gradually transforming the management of type 1 diabetes in children and adults. In this review we consider the supporting evidence in terms of glucose control and quality of life for presently available closed-loop systems and those in development, including dual-hormone closed-loop systems. We also comment on alternative ‘do-it-yourself’ closed-loop systems. We remark on issues associated with clinical adoption of these approaches, including training provision, and consider limitations of presently available closed-loop systems and areas for future enhancements to further improve outcomes and reduce the burden of diabetes management.</p><p class="para" id="Par2"><div class="imageVideo"><img src="/dataresources/secured/content-1766028464431-2628c69e-2ada-4e7a-a534-b8e9b01d2749/assets/125_2021_5391_Figa_HTML.jpg" alt=""/></div></p><div class="section" id="N65551"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65554">The online version contains a slideset of the figures for download available at 10.1007/s00125-021-05391-w.</p></div>]]></description>
            <pubDate><![CDATA[2021-02-06T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The promise of stem cell-derived islet replacement therapy]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766028358796-3952d359-ebae-40b2-8999-963dabeb2227/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1007/s00125-020-05367-2</link>
            <description><![CDATA[<p class="para" id="Par1">Present-day treatments for people that are insulin dependent require multiple insulin injections, sometimes with an insulin pump, coupled with regular blood glucose monitoring. The availability of modified insulins, each with peaks of activity at varying times, has improved diabetes management. On the other hand, there have been impressive results leading to insulin independence by transplantation of cadaveric islets coupled with immune suppression. This review focuses on the possibility of treating diabetes with cellular transplants, specifically with the use of pluripotent stem cells, to produce a virtually unlimited and uniform supply of human islet-like clusters by directed differentiation. Prospects for improving the in vitro differentiation of human endocrine cells for the study of endocrine function and their possible clinical uses are also discussed.</p><p class="para" id="Par2"><div class="imageVideo"><img src="/dataresources/secured/content-1766028358796-3952d359-ebae-40b2-8999-963dabeb2227/assets/125_2020_5367_Figa_HTML.jpg" alt=""/></div></p><div class="section" id="N65551"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65554">The online version of this article (10.1007/s00125-020-05367-2) contains a slideset of the figures for download.</p></div>]]></description>
            <pubDate><![CDATA[2021-01-16T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[A systematic review of the factors influencing microbial colonization of the preterm infant gut]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766021518878-1244f309-c428-4138-ace9-cdf067bf284f/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1884514</link>
            <description><![CDATA[<p class="para" id="N65541">Prematurity coupled with the necessary clinical management of preterm (PT) infants introduces multiple factors that can interfere with microbial colonization. This study aimed to review the perinatal, physiological, pharmacological, dietary, and environmental factors associated with gut microbiota of PT infants. A total of 587 articles were retrieved from a search of multiple databases. Sixty studies were included in the review after removing duplicates and articles that did not meet the inclusion criteria. Review of this literature revealed that evidence converged on the effect of postnatal age, mode of delivery, use of antibiotics, and consumption of human milk in the composition of gut microbiota of PT infants. Less evidence was found for associations with race, sex, use of different fortifiers, macronutrients, and other medications. Future studies with rich metadata are needed to further explore the impact of the PT exposome on the development of the microbiota in this high-risk population.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[A systematic review of the factors influencing microbial colonization of the preterm infant gut]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766021518878-1244f309-c428-4138-ace9-cdf067bf284f/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1884514</link>
            <description><![CDATA[<p class="para" id="N65541">Prematurity coupled with the necessary clinical management of preterm (PT) infants introduces multiple factors that can interfere with microbial colonization. This study aimed to review the perinatal, physiological, pharmacological, dietary, and environmental factors associated with gut microbiota of PT infants. A total of 587 articles were retrieved from a search of multiple databases. Sixty studies were included in the review after removing duplicates and articles that did not meet the inclusion criteria. Review of this literature revealed that evidence converged on the effect of postnatal age, mode of delivery, use of antibiotics, and consumption of human milk in the composition of gut microbiota of PT infants. Less evidence was found for associations with race, sex, use of different fortifiers, macronutrients, and other medications. Future studies with rich metadata are needed to further explore the impact of the PT exposome on the development of the microbiota in this high-risk population.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Delivery of oligonucleotide‐based therapeutics: challenges and opportunities]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766009377888-05932986-8392-428a-8aad-d678ec1ff0e0/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202013243</link>
            <description><![CDATA[<p class="para" id="N65542">Nucleic acid‐based therapeutics that regulate gene expression have been developed towards clinical use at a steady pace for several decades, but in recent years the field has been accelerating. To date, there are 11 marketed products based on antisense oligonucleotides, aptamers and small interfering RNAs, and many others are in the pipeline for both academia and industry. A major technology trigger for this development has been progress in oligonucleotide chemistry to improve the drug properties and reduce cost of goods, but the main hurdle for the application to a wider range of disorders is delivery to target tissues. The adoption of delivery technologies, such as conjugates or nanoparticles, has been a game changer for many therapeutic indications, but many others are still awaiting their eureka moment. Here, we cover the variety of methods developed to deliver nucleic acid‐based therapeutics across biological barriers and the model systems used to test them. We discuss important safety considerations and regulatory requirements for synthetic oligonucleotide chemistries and the hurdles for translating laboratory breakthroughs to the clinic. Recent advances in the delivery of nucleic acid‐based therapeutics and in the development of model systems, as well as safety considerations and regulatory requirements for synthetic oligonucleotide chemistries are discussed in this review on oligonucleotide‐based therapeutics.</p><p class="para" id="N65541">Recent advances in the delivery of nucleic acid‐based therapeutics and in the development of model systems, as well as safety considerations and regulatory requirements for synthetic oligonucleotide chemistries are discussed in this review on oligonucleotide‐based therapeutics.<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1766009377888-05932986-8392-428a-8aad-d678ec1ff0e0/assets/EMMM-13-e13243-g003.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-04-06T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Delivery of oligonucleotide‐based therapeutics: challenges and opportunities]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766009377888-05932986-8392-428a-8aad-d678ec1ff0e0/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202013243</link>
            <description><![CDATA[<p class="para" id="N65542">Nucleic acid‐based therapeutics that regulate gene expression have been developed towards clinical use at a steady pace for several decades, but in recent years the field has been accelerating. To date, there are 11 marketed products based on antisense oligonucleotides, aptamers and small interfering RNAs, and many others are in the pipeline for both academia and industry. A major technology trigger for this development has been progress in oligonucleotide chemistry to improve the drug properties and reduce cost of goods, but the main hurdle for the application to a wider range of disorders is delivery to target tissues. The adoption of delivery technologies, such as conjugates or nanoparticles, has been a game changer for many therapeutic indications, but many others are still awaiting their eureka moment. Here, we cover the variety of methods developed to deliver nucleic acid‐based therapeutics across biological barriers and the model systems used to test them. We discuss important safety considerations and regulatory requirements for synthetic oligonucleotide chemistries and the hurdles for translating laboratory breakthroughs to the clinic. Recent advances in the delivery of nucleic acid‐based therapeutics and in the development of model systems, as well as safety considerations and regulatory requirements for synthetic oligonucleotide chemistries are discussed in this review on oligonucleotide‐based therapeutics.</p><p class="para" id="N65541">Recent advances in the delivery of nucleic acid‐based therapeutics and in the development of model systems, as well as safety considerations and regulatory requirements for synthetic oligonucleotide chemistries are discussed in this review on oligonucleotide‐based therapeutics.<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1766009377888-05932986-8392-428a-8aad-d678ec1ff0e0/assets/EMMM-13-e13243-g003.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-04-06T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Understanding the relationship between norovirus diversity and immunity]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1766004354114-47255e49-27ee-49c8-8fe4-6fabeed5e5a6/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1900994</link>
            <description><![CDATA[<p class="para" id="N65541">Human noroviruses are the most common viral cause of acute gastroenteritis worldwide. Currently, there are no approved vaccines or specific therapeutics to treat the disease. Some obstacles delaying the development of a norovirus vaccine are: (i) the extreme diversity presented by noroviruses; (ii) our incomplete understanding of immunity to noroviruses; and (iii) the lack of a robust cell culture system or animal model for human noroviruses. Recent advances in <i>in vitro</i> cultivation of norovirus, novel approaches applied to viral genomics and immunity, and completion of vaccine trials and birth cohort studies have provided new information toward a better understanding of norovirus immunity. Here, we will discuss the complex relationship between norovirus diversity and correlates of protection for human noroviruses, and how this information could be used to guide the development of cross-protective vaccines.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Non‐genetic heterogeneity, altered cell fate and differentiation therapy]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765995142164-0ac6348b-2762-4891-8035-71f580cb6064/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202012670</link>
            <description><![CDATA[<p class="para" id="N65542">Altered capacity for self‐renewal and differentiation is a hallmark of cancer, and many tumors are composed of cells with a developmentally immature phenotype. Among the malignancies where processes that govern cell fate decisions have been studied most extensively is acute myeloid leukemia (AML), a disease characterized by the presence of large numbers of “blasts” that resemble myeloid progenitors. Classically, the defining properties of AML cells were said to be aberrant self‐renewal and a block of differentiation, and the term “differentiation therapy” was coined to describe drugs that promote the maturation of leukemic blasts. Notionally however, the simplistic view that such agents “unblock” differentiation is at odds with the cancer stem cell (CSC) hypothesis that posits that tumors are hierarchically organized and that CSCs, which underpin cancer growth, retain the capacity to progress to a developmentally more mature state. Herein, we will review recent developments that are providing unprecedented insights into non‐genetic heterogeneity both at steady state and in response to treatment, and propose a new conceptual framework for therapies that aim to alter cell fate decisions in cancer.</p><p class="para" id="N65541">This review by A. Lewis and L. Kats summarizes the recent advances in our understanding of "differentiation therapy". The authors share new developments into non‐genetic heterogeneity, and propose a conceptual framework for therapies that aim to alter cell fate decisions in cancer.<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1765995142164-0ac6348b-2762-4891-8035-71f580cb6064/assets/EMMM-13-e12670-g005.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-02-08T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Non‐genetic heterogeneity, altered cell fate and differentiation therapy]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765995142164-0ac6348b-2762-4891-8035-71f580cb6064/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202012670</link>
            <description><![CDATA[<p class="para" id="N65542">Altered capacity for self‐renewal and differentiation is a hallmark of cancer, and many tumors are composed of cells with a developmentally immature phenotype. Among the malignancies where processes that govern cell fate decisions have been studied most extensively is acute myeloid leukemia (AML), a disease characterized by the presence of large numbers of “blasts” that resemble myeloid progenitors. Classically, the defining properties of AML cells were said to be aberrant self‐renewal and a block of differentiation, and the term “differentiation therapy” was coined to describe drugs that promote the maturation of leukemic blasts. Notionally however, the simplistic view that such agents “unblock” differentiation is at odds with the cancer stem cell (CSC) hypothesis that posits that tumors are hierarchically organized and that CSCs, which underpin cancer growth, retain the capacity to progress to a developmentally more mature state. Herein, we will review recent developments that are providing unprecedented insights into non‐genetic heterogeneity both at steady state and in response to treatment, and propose a new conceptual framework for therapies that aim to alter cell fate decisions in cancer.</p><p class="para" id="N65541">This review by A. Lewis and L. Kats summarizes the recent advances in our understanding of "differentiation therapy". The authors share new developments into non‐genetic heterogeneity, and propose a conceptual framework for therapies that aim to alter cell fate decisions in cancer.<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1765995142164-0ac6348b-2762-4891-8035-71f580cb6064/assets/EMMM-13-e12670-g005.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-02-08T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Can ozone inactivate SARS-CoV-2? A review of mechanisms and performance on viruses]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765994144385-970538e2-d9c9-4613-b099-9afeead8d313/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.jhazmat.2021.125658</link>
            <description><![CDATA[<p class="para" id="N65540">Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) pandemic has challenged societies around the globe. Technologies based on ozone, a powerful oxidant, have been evaluated to inactivate this virus in aerosols and fomites. However, the high data diversity hinders the possibility of establishing a common ground for determining best practices for the use of these technologies. Furthermore, there is a lack of consensus regarding which are the main mechanisms of ozone virus inactivation. This critical review examined the most relevant information available regarding ozone application in gas-phase for different viruses inactivation (including recent publications dealing with SARS-CoV-2), and pointed towards envelope alteration as the main reaction pathway for enveloped viruses, such as is the case of SARS-CoV-2. It could also be concluded that gaseous ozone can be indeed an effective disinfectant, successfully inactivating viruses such us influenza A H1N1, MERS-CoV, SARS-CoV-1 or even SARS-CoV-2 in aerosols or fomites. In reviewed works, low ozone exposures, just around 0.1–0.4 mg L<sup>-1</sup> min, achieve about 4 log<sub>10</sub> of inactivation in aerosols, while exposures between 1 and 4 mg L<sup>-1</sup> min may be needed to guarantee an inactivation of 3–4 log<sub>10</sub> in different fomites. Although further studies are required, ozone is an effective candidate to be used against SARS-CoV-2 or other viruses in surfaces and indoor locations.</p><p class="para" id="N65543"><div class="section" id="fig0020"><div class="img"><div class="imgeVideo"><div class="img-fullscreenIcon" onClick="javascript:showImageContent('fig0020');"><img src="/public/images/journalImg/fullscreen.png"/></div><div class="imageVideo"><img src="/dataresources/secured/content-1765994144385-970538e2-d9c9-4613-b099-9afeead8d313/assets/ga1_lrg.jpg" alt=""/></div></div></div></div></p>]]></description>
            <pubDate><![CDATA[2021-03-13T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Community-directed distributors—The “foot soldiers” in the fight to control and eliminate neglected tropical diseases]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765990915742-9be668b8-bf2d-4976-a248-23f839fc40f5/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0009088</link>
            <description><![CDATA[<p class="para" id="N65539">The neglected tropical diseases (NTDs) affect hundreds of millions of people, predominantly in rural, often difficult-to-access areas, poorly served by national health services. Here, we review the contributions of 4.8 million community-directed distributors (CDDs) of medicines over 2 decades in 146,000 communities in 27 sub-Saharan African countries to control or eliminate onchocerciasis and lymphatic filariasis (LF). We examine their role in the control of other NTDs, malaria, HIV/AIDS interventions, immunisation campaigns, and support to overstretched health service personnel. We are of the opinion that CDDs as community selected, trained, and experienced “foot soldiers,” some of whom were involved in the Ebola outbreak responses at the community level in Liberia, if retrained, can assist community leaders and support health workers (HWs) in the ongoing Coronavirus Disease 2019 (COVID-19) crisis. The review highlights the improved treatment coverage where there are women CDDs, the benefits and lessons from the work of CDDs, their long-term engagement, and the challenges they face in healthcare delivery. It underscores the value of utilising the CDD model for strong community engagement and recommends the model, with some review, to hasten the achievement of the NTD 2030 goal and assist the health system cope with evolving epidemics and other challenges. We propose that, based on the unprecedented progress made in the control of NTDs directly linked to community engagement and contributions of CDDs “foot soldiers,” they deserve regional and global recognition. We also suggest that the World Health Organization (WHO) and other international stakeholders promote policy and guidance for countries to adapt this model for the elimination of NTDs and to strengthen national health services. This will enhance the accomplishment of some Sustainable Development Goals (SDGs) by 2030 in sub-Saharan Africa.</p><p class="para" id="N65542">Community-directed distributors (CDDs), sometimes known as community health workers (CHWs), have proved to be critical in the delivery of medicines and other tools for the control of neglected tropical diseases (NTDs), prevention of malaria, and other beneficial health interventions. The distributors are the unsung heroes and heroines without whom the health of hundreds of thousands of communities in rural Africa would be worse than it is today. In this paper, we document more than 2 decades (1997–2019) of the contributions of 146,000 communities and 4.8 million CDDs of medicines for NTDs, unpaid or minimally compensated, some have provided 18 years of uninterrupted service. We report on the burden of work and their perspectives of the challenges involved in mass drug administration (MDA) across 27 countries in sub-Saharan Africa. We suggest that they have not been adequately recognised and that harnessing such community human resources could contribute to improving health system’s responses to the ongoing Coronavirus Disease 2019 (COVID-19) crisis. We recommend policy measures for a wider application of existing networks of CDDs by countries’ health systems to consolidate and accelerate the achievements made as well as for the attainment of the goals set forth in the newly developed World Health Organization (WHO) NTD Roadmap.</p>]]></description>
            <pubDate><![CDATA[2021-03-04T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Therapeutic advances in the topical treatment of cutaneous leishmaniasis: A review]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765988492810-ec416799-b9db-49d9-a1dd-72281d845cc3/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0009099</link>
            <description><![CDATA[<p class="para" id="N65539">Cutaneous leishmaniasis has been endemic since decades. Millions of cases are reported worldwide specially in developing and underdeveloped countries. There are 2 major types of cutaneous leishmaniasis based on the causating species found in different regions of the world. These include New and Old World cutaneous leishmaniasis, which are self-healing, but if not treated, these may cause severe scars and many other complications like mucosal involvement. The conventional gold standard treatment for both types is mainly intralesional or parenteral administration of antimonial. Lately, a great deal of research has been done on development of topical treatment based on single agent or combination therapy. This review summarizes the current state of literature regarding therapeutic outcome of topical treatment against cutaneous leishmaniasis caused by different species in different regions.</p>]]></description>
            <pubDate><![CDATA[2021-03-03T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Measuring the global burden of chikungunya and Zika viruses: A systematic review]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765983632027-4a5a85ca-54b9-4aff-9be3-9f9d44f8702b/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0009055</link>
            <description><![CDATA[<p class="para" id="N65539">Throughout the last decade, chikungunya virus (CHIKV) and Zika virus (ZIKV) infections have spread globally, causing a spectrum of disease that ranges from self-limited febrile illness to permanent severe disability, congenital anomalies, and early death. Nevertheless, estimates of their aggregate health impact are absent from the literature and are currently omitted from the Global Burden of Disease (GBD) reports. We systematically reviewed published literature and surveillance records to evaluate the global burden caused by CHIKV and ZIKV between 2010 and 2019, to calculate estimates of their disability-adjusted life year (DALY) impact. Extracted data on acute, chronic, and perinatal outcomes were used to create annualized DALY estimates, following techniques outlined in the GBD framework. This study is registered with PROSPERO (CRD42020192502). Of 7,877 studies identified, 916 were screened in detail, and 21 were selected for inclusion. Available data indicate that CHIKV and ZIKV caused the average yearly loss of over 106,000 and 44,000 DALYs, respectively, between 2010 and 2019. Both viruses caused substantially more burden in the Americas than in any other World Health Organization (WHO) region. This unequal distribution is likely due to a combination of limited active surveillance reporting in other regions and the lack of immunity that left the previously unexposed populations of the Americas susceptible to severe outbreaks during the last decade. Long-term rheumatic sequelae provided the largest DALY component for CHIKV, whereas congenital Zika syndrome (CZS) contributed most significantly for ZIKV. Acute symptoms and early mortality accounted for relatively less of the overall burden. Suboptimal reporting and inconsistent diagnostics limit precision when determining arbovirus incidence and frequency of complications. Despite these limitations, it is clear from our assessment that CHIKV and ZIKV represent a significant cause of morbidity that is not included in current disease burden reports. These results suggest that transmission-blocking strategies, including vector control and vaccine development, remain crucial priorities in reducing global disease burden through prevention of potentially devastating arboviral outbreaks.</p><p class="para" id="N65542">Chikungunya and Zika are 2 mosquito-borne viral diseases that can cause both acute symptoms and long-term, debilitating complications in infected individuals. Chikungunya is best known as a cause of persistent arthritis in otherwise recovered patients and Zika as a cause of cognitive, motor, and sensory anomalies in newborn children. Both diseases emerged in the Americas within the last decade and have since spread rapidly throughout the region. Despite their widespread transmission there and throughout much of the world, chikungunya and Zika remain neglected diseases. One of the most significant obstacles to address their spread is a lack of data involving their burden. We searched the published literature and surveillance reports to collect information about the incidence, mortality, and morbidity associated with each of these diseases to estimate their regional and global burden during the last decade. Our estimates confirm that chikungunya and Zika caused substantial burden throughout this time frame and place them among the most problematic mosquito-borne viral diseases worldwide. We found that the largest proportion of global burden linked to each disease between 2010 and 2019 occurred in the Americas, although this observation is likely due to limited reporting in other regions.</p>]]></description>
            <pubDate><![CDATA[2021-03-04T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Coronavirus in water media: Analysis, fate, disinfection and epidemiological applications]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765968678675-db47ba02-1e0d-4ee1-9b43-5ddbfa29a7f0/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.jhazmat.2021.125580</link>
            <description><![CDATA[<p class="para" id="N65540">Considerable attention has been recently given to possible transmission of SARS-CoV-2 via water media. This review addresses this issue and examines the fate of coronaviruses (CoVs) in water systems, with particular attention to the recently available information on the novel SARS-CoV-2. The methods for the determination of viable virus particles and quantification of CoVs and, in particular, of SARS-CoV-2 in water and wastewater are discussed with particular regard to the methods of concentration and to the emerging methods of detection. The analysis of the environmental stability of CoVs, with particular regard of SARS-CoV-2, and the efficacy of the disinfection methods are extensively reviewed as well. This information provides a broad view of the state-of-the-art for researchers involved in the investigation of CoVs in aquatic systems, and poses the basis for further analyses and discussions on the risk associated to the presence of SARS-CoV-2 in water media. The examined data indicates that detection of the virus in wastewater and natural water bodies provides a potentially powerful tool for quantitative microbiological risk assessment (QMRA) and for wastewater-based epidemiology (WBE) for the evaluation of the level of circulation of the virus in a population. Assays of the viable virions in water media provide information on the integrity, capability of replication (in suitable host species) and on the potential infectivity. Challenges and critical issues relevant to the detection of coronaviruses in different water matrixes with both direct and surrogate methods as well as in the implementation of epidemiological tools are presented and critically discussed.</p><p class="para" id="N65543"><div class="section" id="fig0025"><div class="img"><div class="imgeVideo"><div class="img-fullscreenIcon" onClick="javascript:showImageContent('fig0025');"><img src="/public/images/journalImg/fullscreen.png"/></div><div class="imageVideo"><img src="/dataresources/secured/content-1765968678675-db47ba02-1e0d-4ee1-9b43-5ddbfa29a7f0/assets/ga1_lrg.jpg" alt=""/></div></div></div></div></p>]]></description>
            <pubDate><![CDATA[2021-03-05T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Current understanding of the interplays between host hormones and plant viral infections]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765949239435-a88649da-cb22-4de0-827d-9d3fdbcb5f34/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009242</link>
            <description><![CDATA[<p class="para" id="N65539">Phytohormones mediate plant development and responses to stresses caused by biotic agents or abiotic factors. The functions of phytohormones in responses to viral infection have been intensively studied, and the emerging picture of complex mechanisms provides insights into the roles that phytohormones play in defense regulation as a whole. These hormone signaling pathways are not simple linear or isolated cascades, but exhibit crosstalk with each other. Here, we summarized the current understanding of recent advances for the classical defense hormones salicylic acid (SA), jasmonic acid (JA), and ethylene (ET) and also the roles of abscisic acid (ABA), auxin, gibberellic acid (GA), cytokinins (CKs), and brassinosteroids (BRs) in modulating plant–virus interactions.</p>]]></description>
            <pubDate><![CDATA[2021-02-25T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Nonimmune antibody interactions of Group A <i>Streptococcus</i> M and M-like proteins]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765948243820-0ea0a1d9-92b6-401f-8ea8-84f862648a8a/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009248</link>
            <description><![CDATA[<p class="para" id="N65539">M and M-like proteins are major virulence factors of the widespread and potentially deadly bacterial pathogen <i>Streptococcus pyogenes</i>. These proteins confer resistance against innate and adaptive immune responses by recruiting specific human proteins to the streptococcal surface. Nonimmune recruitment of immunoglobulins G (IgG) and A (IgA) through their fragment crystallizable (Fc) domains by M and M-like proteins was described almost 40 years ago, but its impact on virulence remains unresolved. These interactions have been suggested to be consequential under immune conditions at mucosal surfaces and in secretions but not in plasma, while other evidence suggests importance in evading phagocytic killing in nonimmune blood. Recently, an indirect effect of Fc-binding through ligand-induced stabilization of an M-like protein was shown to increase virulence. Nonimmune recruitment has also been seen to contribute to tissue damage in animal models of autoimmune diseases triggered by <i>S</i>. <i>pyogenes</i> infection. The damage was treatable by targeting Fc-binding. This and other potential therapeutic applications warrant renewed attention to Fc-binding by M and M-like proteins.</p>]]></description>
            <pubDate><![CDATA[2021-02-25T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[New insights into the interactions between <i>Blastocystis</i>, the gut microbiota, and host immunity]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765944194918-ffea3e31-a6a8-449e-add8-6b14680994f2/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009253</link>
            <description><![CDATA[<p class="para" id="N65539">The human gut microbiota is a diverse and complex ecosystem that is involved in beneficial physiological functions as well as disease pathogenesis. <i>Blastocystis</i> is a common protistan parasite and is increasingly recognized as an important component of the gut microbiota. The correlations between <i>Blastocystis</i> and other communities of intestinal microbiota have been investigated, and, to a lesser extent, the role of this parasite in maintaining the host immunological homeostasis. Despite recent studies suggesting that <i>Blastocystis</i> decreases the abundance of beneficial bacteria, most reports indicate that <i>Blastocystis</i> is a common component of the healthy gut microbiome. This review covers recent finding on the potential interactions between <i>Blastocystis</i> and the gut microbiota communities and its roles in regulating host immune responses.</p>]]></description>
            <pubDate><![CDATA[2021-02-25T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[A systematic literature review of schistosomiasis in urban and peri-urban settings]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765943180424-8f600495-1562-425d-bfe1-0e75d85bf473/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0008995</link>
            <description><![CDATA[<div class="section" id="sec001"><h3 class="BHead" id="nov000-1">Background</h3><p class="para" id="N65543">Schistosomiasis is a parasitic disease caused by trematode worms of the genus <i>Schistosoma</i> and belongs to the neglected tropical diseases. The disease has been reported in 78 countries, with around 290.8 million people in need of treatment in 2018. Schistosomiasis is predominantly considered a rural disease with a subsequent focus of research and control activities in rural settings. Over the past decades, occurrence and even expansion of schistosomiasis foci in peri-urban and urban settings have increasingly been observed. Rural–urban migration in low- and middle-income countries and subsequent rapid and unplanned urbanization are thought to explain these observations. Fifty-five percent (55%) of the world population is already estimated to live in urban areas, with a projected increase to 68% by 2050. In light of rapid urbanization and the efforts to control morbidity and ultimately achieve elimination of schistosomiasis, it is important to deepen our understanding of the occurrence, prevalence, and transmission of schistosomiasis in urban and peri-urban settings. A systematic literature review looking at urban and peri-urban schistosomiasis was therefore carried out as a first step to address the research and mapping gap.</p></div><div class="section" id="sec002"><h3 class="BHead" id="nov000-2">Methodology</h3><p class="para" id="N65552">Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines, a systematic computer-aided literature review was carried out using PubMed, ScienceDirect, and the World Health Organization Database in November 2019, which was updated in March 2020. Only papers for which at least the abstract was available in English were used. Relevant publications were screened, duplicates were removed, guidelines for eligibility were applied, and eligible studies were reviewed. Studies looking at human <i>Schistosoma</i> infections, prevalence, and intensity of infection in urban and peri-urban settings were included as well as those focusing on the intermediate host snails.</p></div><div class="section" id="sec003"><h3 class="BHead" id="nov000-3">Principal findings</h3><p class="para" id="N65561">A total of 248 publications met the inclusion criteria. The selected studies confirm that schistosomiasis is prevalent in peri-urban and urban areas in the countries assessed. Earlier studies report higher prevalence levels in urban settings compared to data extracted from more recent publications, yet the challenge of migration, rapid uncontrolled urbanization, and resulting poor living conditions highlight the potential for continuous or even newly established transmission to take place.</p></div><div class="section" id="sec004"><h3 class="BHead" id="nov000-4">Conclusions</h3><p class="para" id="N65567">The review indicates that schistosomiasis has long existed in urban and peri-urban areas and remains a public health problem. There is, however, a challenge of comparability of settings due to the lack of a clear definition of what constitutes urban and peri-urban. There is a pressing need for improved monitoring of schistosomiasis in urban communities and consideration of treatment strategies.</p></div><p class="para" id="N65542">Schistosomiasis is an infectious parasitic disease and one of the 20 diseases considered by the World Health Organization as a neglected tropical disease. It is typically associated with poor environmental and sanitary conditions, primarily affecting rural communities. However, with the currently observed rapid urbanization and predicted two-thirds of the world population living in urban areas by 2050, concerns are raised about a spread of schistosomiasis to urban and peri-urban areas. At the same time, there seems to be little knowledge of the extent of schistososomiasis in urban areas. In light of the efforts to control morbidity and ultimately achieve elimination of schistosomiasis as well as reaching Sustainable Development Goals 3 “achieve health for all” and 11 “make human settlements inclusive, safe, resilient, and sustainable,” this systematic literature review was conducted to address the existing research and mapping gaps and to contribute to the understanding of the burden of schistosomiasis in areas that have not, as yet, been the focus of control efforts and mass drug administration programs. The review suggests that rapid and unorganized urbanization and resulting poor living conditions in urban and peri-urban areas may lead to new disease foci and thereby increase the overall disease burden. Research and policy implications are discussed.</p>]]></description>
            <pubDate><![CDATA[2021-02-25T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Visualizing the dynamics of tuberculosis pathology using molecular imaging]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765942863195-1b25c4a7-c3f8-4627-892e-83dbd9983a63/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1172/JCI145107</link>
            <description><![CDATA[<p class="para" id="N65539">Nearly 140 years after Robert Koch discovered <i>Mycobacterium tuberculosis</i>, tuberculosis (TB) remains a global threat and a deadly human pathogen. <i>M</i>. <i>tuberculosis</i> is notable for complex host-pathogen interactions that lead to poorly understood disease states ranging from latent infection to active disease. Additionally, multiple pathologies with a distinct local milieu (bacterial burden, antibiotic exposure, and host response) can coexist simultaneously within the same subject and change independently over time. Current tools cannot optimally measure these distinct pathologies or the spatiotemporal changes. Next-generation molecular imaging affords unparalleled opportunities to visualize infection by providing holistic, 3D spatial characterization and noninvasive, temporal monitoring within the same subject. This rapidly evolving technology could powerfully augment TB research by advancing fundamental knowledge and accelerating the development of novel diagnostics, biomarkers, and therapeutics.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Carbohydrates great and small, from dietary fiber to sialic acids: How glycans influence the gut microbiome and affect human health]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765935722941-e3406557-5a22-4e9d-9525-c27174797025/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1869502</link>
            <description><![CDATA[<p class="para" id="N65541">Gut microbiome composition depends heavily upon diet and has strong ties to human health. Dietary carbohydrates shape the gut microbiome by providing a potent nutrient source for particular microbes. This review explores how dietary carbohydrates in general, including individual monosaccharides and complex polysaccharides, influence the gut microbiome with subsequent effects on host health and disease. In particular, the effects of sialic acids, a prominent and influential class of monosaccharides, are discussed. Complex plant carbohydrates, such as dietary fiber, generally promote microbial production of compounds beneficial to the host while preventing degradation of host carbohydrates from colonic mucus. In contrast, simple and easily digestible sugars such as glucose are often associated with adverse effects on health and the microbiome. The monosaccharide class of sialic acids exerts a powerful but nuanced effect on gut microbiota. Sialic acid consumption (in monosaccharide form, or as part of human milk oligosaccharides or certain animal-based foods) drives the growth of organisms with sialic acid metabolism capabilities. Minor chemical modifications of Neu5Ac, the most common form of sialic acid, can alter these effects. All aspects of carbohydrate composition are therefore relevant to consider when designing dietary therapeutic strategies to alter the gut microbiome.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[The contribution of gut bacterial metabolites in the human immune signaling pathway of non-communicable diseases]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765935472156-1eda9147-0f44-4690-aca6-d1b8d940d507/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1882927</link>
            <description><![CDATA[<p class="para" id="N65541">The interaction disorder between gut microbiota and its host has been documented in different non-communicable diseases (NCDs) such as metabolic syndrome, neurodegenerative disease, and autoimmune disease. The majority of these altered interactions arise through metabolic cross-talk between gut microbiota and host immune system, inducing a low-grade chronic inflammation that characterizes all NCDs. In this review, we discuss the contribution of bacterial metabolites to immune signaling pathways involved in NCDs. We then review recent advances that aid to rationally design microbial therapeutics. A deeper understanding of these intersections between host and gut microbiota metabolism using metabolomics-based system biology platform promises to reveal the fundamental mechanisms that drive metabolic predispositions to disease and suggest new avenues to use microbial therapeutic opportunities for NCDs treatment and prevention.</p><p class="para" id="N65543"><b>Abbreviations</b>: NCDs: non-communicable disease, IBD: inflammatory bowel disease, IL: interleukin, T2D: type 2 diabetes, SCFAs: short-chain fatty acids, HDAC: histone deacetylases, GPCR: G-protein coupled receptors, 5-HT: 5-hydroxytryptamine receptor signaling, DCs: dendritic cells, IECs: intestinal epithelial cells, T-reg: T regulatory cell, NF-κB: nuclear factor κB, TNF-α: tumor necrosis factor alpha, Th: T helper cell, CNS: central nervous system, ECs: enterochromaffin cells, NSAIDs: non-steroidal anti-inflammatory drugs, AhR: aryl hydrocarbon receptor, IDO: indoleamine 2,3-dioxygenase, QUIN: quinolinic acid, PC: phosphatidylcholine, TMA: trimethylamine, TMAO: trimethylamine <i>N</i>-oxide, CVD: cardiovascular disease, NASH: nonalcoholic steatohepatitis, BAs: bile acids, FXR: farnesoid X receptor, CDCA: chenodeoxycholic acid, DCA: deoxycholic acid, LCA: lithocholic acid, UDCA: ursodeoxycholic acid, CB: cannabinoid receptor, COBRA: constraint-based reconstruction and analysis</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[The contribution of gut bacterial metabolites in the human immune signaling pathway of non-communicable diseases]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765935472156-1eda9147-0f44-4690-aca6-d1b8d940d507/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1882927</link>
            <description><![CDATA[<p class="para" id="N65541">The interaction disorder between gut microbiota and its host has been documented in different non-communicable diseases (NCDs) such as metabolic syndrome, neurodegenerative disease, and autoimmune disease. The majority of these altered interactions arise through metabolic cross-talk between gut microbiota and host immune system, inducing a low-grade chronic inflammation that characterizes all NCDs. In this review, we discuss the contribution of bacterial metabolites to immune signaling pathways involved in NCDs. We then review recent advances that aid to rationally design microbial therapeutics. A deeper understanding of these intersections between host and gut microbiota metabolism using metabolomics-based system biology platform promises to reveal the fundamental mechanisms that drive metabolic predispositions to disease and suggest new avenues to use microbial therapeutic opportunities for NCDs treatment and prevention.</p><p class="para" id="N65543"><b>Abbreviations</b>: NCDs: non-communicable disease, IBD: inflammatory bowel disease, IL: interleukin, T2D: type 2 diabetes, SCFAs: short-chain fatty acids, HDAC: histone deacetylases, GPCR: G-protein coupled receptors, 5-HT: 5-hydroxytryptamine receptor signaling, DCs: dendritic cells, IECs: intestinal epithelial cells, T-reg: T regulatory cell, NF-κB: nuclear factor κB, TNF-α: tumor necrosis factor alpha, Th: T helper cell, CNS: central nervous system, ECs: enterochromaffin cells, NSAIDs: non-steroidal anti-inflammatory drugs, AhR: aryl hydrocarbon receptor, IDO: indoleamine 2,3-dioxygenase, QUIN: quinolinic acid, PC: phosphatidylcholine, TMA: trimethylamine, TMAO: trimethylamine <i>N</i>-oxide, CVD: cardiovascular disease, NASH: nonalcoholic steatohepatitis, BAs: bile acids, FXR: farnesoid X receptor, CDCA: chenodeoxycholic acid, DCA: deoxycholic acid, LCA: lithocholic acid, UDCA: ursodeoxycholic acid, CB: cannabinoid receptor, COBRA: constraint-based reconstruction and analysis</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Iridium‐Catalysed C−H Borylation of Heteroarenes: Balancing Steric and Electronic Regiocontrol]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765934750133-d205c010-cbbf-4cb5-b001-9529ac5ecc99/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.202001520</link>
            <description><![CDATA[<p class="para" id="N65541">The iridium‐catalysed borylation of aromatic C−H bonds has become the preferred method for the synthesis of aromatic organoboron compounds. The reaction is highly efficient, tolerant of a broad range of substituents and can be applied to both carbocyclic and heterocyclic substrates. The regioselectivity of C−H activation is dominated by steric considerations and there have been considerable efforts to develop more selective processes for less constrained substrates. However, most of these have focused on benzenoid‐type substrates and in contrast, heteroarenes remain much desired but more challenging substrates with the position and/or nature of the heteroatom(s) significantly affecting reactivity and regioselectivity. This review will survey the borylation of heteroarenes, focusing on the influence of steric and electronic effects on regiochemical outcome and, by linking to current mechanistic understandings, will provide insights to what is currently possible and where further developments are required.</p><p class="para" id="N65540">
<b>Which C−H bond?</b> The iridium‐catalysed C−H borylation reaction is a powerful method for the preparation of aromatic organoboronate esters. Sterically regulated regioselectivity dominates carbocyclic aromatic C−H borylation. In contrast, heterocyclic aromatics display a much greater influence from electronic effects. In this review, examples of heterocyclic C−H borylation are surveyed, and the origins of heterocyclic C−H borylation regioselectivities discussed.<div class="section"><div class="box" id="N65545"><div class="imageVideo"><img src="/dataresources/secured/content-1765934750133-d205c010-cbbf-4cb5-b001-9529ac5ecc99/assets/ANIE-60-2796-g045.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-11-03T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Understanding the Interaction of Polyelectrolyte Architectures with Proteins and Biosystems]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765934408207-7a2cab9c-7bac-420c-b91b-b2026218b904/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.202006457</link>
            <description><![CDATA[<p class="para" id="N65541">The counterions neutralizing the charges on polyelectrolytes such as DNA or heparin may dissociate in water and greatly influence the interaction of such polyelectrolytes with biomolecules, particularly proteins. In this Review we give an overview of studies on the interaction of proteins with polyelectrolytes and how this knowledge can be used for medical applications. Counterion release was identified as the main driving force for the binding of proteins to polyelectrolytes: Patches of positive charge become multivalent counterions of the polyelectrolyte and lead to the release of counterions from the polyelectrolyte and a concomitant increase in entropy. This is shown from investigations on the interaction of proteins with natural and synthetic polyelectrolytes. Special emphasis is paid to sulfated dendritic polyglycerols (dPGS). The Review demonstrates that we are moving to a better understanding of charge–charge interactions in systems of biological relevance. Research along these lines will aid and promote the design of synthetic polyelectrolytes for medical applications.</p><p class="para" id="N65540">Polyelectrolytes such as DNA or heparin are long linear or branched macromolecules onto which charges are appended. The counterions neutralizing these charges can dissociate in water and this will largely determine the interaction of such polyelectrolytes with biomolecules, particularly with proteins. This Review discusses studies on the interaction of proteins with polyelectrolytes and how this knowledge can be used for medical applications.<div class="section"><div class="box" id="N65542"><div class="imageVideo"><img src="/dataresources/secured/content-1765934408207-7a2cab9c-7bac-420c-b91b-b2026218b904/assets/ANIE-60-3882-g021.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-10-27T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Modulation of the PI3K/Akt/mTOR signaling pathway by probiotics as a fruitful target for orchestrating the immune response]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765933774257-1ee2786e-ea9b-42d9-be85-856194cc4db6/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1886844</link>
            <description><![CDATA[<p class="para" id="N65541">The mammalian target of rapamycin (mTOR) and the phosphatidylinositol-3-kinase (PI3K)/protein kinase B or Akt (PKB/Akt) signaling pathways are considered as two but somewhat interconnected significant immune pathways which play complex roles in a variety of physiological processes as well as pathological conditions. Aberrant activation of PI3K/Akt/mTOR signaling pathways has been reported to be associated in a wide variety of human diseases. Over the past few years, growing evidence in <i>in vitro</i> and <i>in vivo</i> models suggest that this sophisticated and subtle cascade mediates the orchestration of the immune response in health and disease through exposure to probiotics. An expanding body of literature has highlighted the contribution of probiotics and PI3K/Akt/mTOR signaling pathways in gastrointestinal disorders, metabolic syndrome, skin diseases, allergy, salmonella infection, and aging. However, longitudinal human studies are possibly required to verify more conclusively whether the investigational tools used to understand the regulation of these pathways might provide effective approaches in the prevention and treatment of various disorders. In this Review, we summarize the experimental evidence from recent peer-reviewed studies and provide a brief overview of the causal relationship between the effects of probiotics and their metabolites on the components of PI3K/Akt/mTOR signaling pathways and human disease.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Modulation of the PI3K/Akt/mTOR signaling pathway by probiotics as a fruitful target for orchestrating the immune response]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765933774257-1ee2786e-ea9b-42d9-be85-856194cc4db6/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1886844</link>
            <description><![CDATA[<p class="para" id="N65541">The mammalian target of rapamycin (mTOR) and the phosphatidylinositol-3-kinase (PI3K)/protein kinase B or Akt (PKB/Akt) signaling pathways are considered as two but somewhat interconnected significant immune pathways which play complex roles in a variety of physiological processes as well as pathological conditions. Aberrant activation of PI3K/Akt/mTOR signaling pathways has been reported to be associated in a wide variety of human diseases. Over the past few years, growing evidence in <i>in vitro</i> and <i>in vivo</i> models suggest that this sophisticated and subtle cascade mediates the orchestration of the immune response in health and disease through exposure to probiotics. An expanding body of literature has highlighted the contribution of probiotics and PI3K/Akt/mTOR signaling pathways in gastrointestinal disorders, metabolic syndrome, skin diseases, allergy, salmonella infection, and aging. However, longitudinal human studies are possibly required to verify more conclusively whether the investigational tools used to understand the regulation of these pathways might provide effective approaches in the prevention and treatment of various disorders. In this Review, we summarize the experimental evidence from recent peer-reviewed studies and provide a brief overview of the causal relationship between the effects of probiotics and their metabolites on the components of PI3K/Akt/mTOR signaling pathways and human disease.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Gut <i>Bacteroides</i> species in health and disease]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765908314128-997ce14b-f639-46a1-a8a7-5cfbaa3f767b/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1848158</link>
            <description><![CDATA[<p class="para" id="N65541">The functional diversity of the mammalian intestinal microbiome far exceeds that of the host organism, and microbial genes contribute substantially to the well-being of the host. However, beneficial gut organisms can also be pathogenic when present in the gut or other locations in the body. Among dominant beneficial bacteria are several species of <i>Bacteroides</i>, which metabolize polysaccharides and oligosaccharides, providing nutrition and vitamins to the host and other intestinal microbial residents. These topics and the specific organismal and molecular interactions that are known to be responsible for the beneficial and detrimental effects of <i>Bacteroides</i> species in humans comprise the focus of this review. The complexity of these interactions will be revealed.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Gut <i>Bacteroides</i> species in health and disease]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765908314128-997ce14b-f639-46a1-a8a7-5cfbaa3f767b/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1848158</link>
            <description><![CDATA[<p class="para" id="N65541">The functional diversity of the mammalian intestinal microbiome far exceeds that of the host organism, and microbial genes contribute substantially to the well-being of the host. However, beneficial gut organisms can also be pathogenic when present in the gut or other locations in the body. Among dominant beneficial bacteria are several species of <i>Bacteroides</i>, which metabolize polysaccharides and oligosaccharides, providing nutrition and vitamins to the host and other intestinal microbial residents. These topics and the specific organismal and molecular interactions that are known to be responsible for the beneficial and detrimental effects of <i>Bacteroides</i> species in humans comprise the focus of this review. The complexity of these interactions will be revealed.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Iron homeostasis in host and gut bacteria – a complex interrelationship]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765908293019-8bb7080f-568a-44a6-a13d-1825485003c2/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1874855</link>
            <description><![CDATA[<p class="para" id="N65541">Iron deficiency is the most frequent nutritional deficiency in the world with an estimated 1.4 billion people affected. The usual way to fight iron deficiency is iron fortification, but this approach is not always effective and can have undesirable side effects including an increase in the growth and virulence of gut bacterial pathogens responsible for diarrhea and gut inflammation. Iron is mainly absorbed in the duodenum and is tightly regulated in mammals. Unabsorbed iron enters the colonic lumen where many microorganisms, referred to as gut microbiota, reside. Iron is essential for these bacteria, and its availability consequently affects this microbial ecosystem. The aim of this review is to provide further insights into the complex relationship between iron and gut microbiota. Given that overcoming anemia caused by iron deficiency is still a challenge today, gut microbiota could help identify more efficient ways to tackle this public health problem.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Iron homeostasis in host and gut bacteria – a complex interrelationship]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765908293019-8bb7080f-568a-44a6-a13d-1825485003c2/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1874855</link>
            <description><![CDATA[<p class="para" id="N65541">Iron deficiency is the most frequent nutritional deficiency in the world with an estimated 1.4 billion people affected. The usual way to fight iron deficiency is iron fortification, but this approach is not always effective and can have undesirable side effects including an increase in the growth and virulence of gut bacterial pathogens responsible for diarrhea and gut inflammation. Iron is mainly absorbed in the duodenum and is tightly regulated in mammals. Unabsorbed iron enters the colonic lumen where many microorganisms, referred to as gut microbiota, reside. Iron is essential for these bacteria, and its availability consequently affects this microbial ecosystem. The aim of this review is to provide further insights into the complex relationship between iron and gut microbiota. Given that overcoming anemia caused by iron deficiency is still a challenge today, gut microbiota could help identify more efficient ways to tackle this public health problem.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[<i>Blautia</i>—a new functional genus with potential probiotic properties?]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765908267980-dd731871-972c-4983-a13c-755f57e7547f/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1875796</link>
            <description><![CDATA[<p class="para" id="N65541"><i>Blautia</i> is a genus of anaerobic bacteria with probiotic characteristics that occur widely in the feces and intestines of mammals. Based on phenotypic and phylogenetic analyses, some species in the genera <i>Clostridium</i> and <i>Ruminococcus</i> have been reclassified as <i>Blautia</i>, so to date, there are 20 new species with valid published names in this genus. An extensive body of research has recently focused on the probiotic effects of this genus, such as biological transformation and its ability to regulate host health and alleviate metabolic syndrome. This article reviews the origin and biological characteristics of <i>Blautia</i> and the factors that affect its abundance and discusses its role in host health, thus laying a theoretical foundation for the development of new functional microorganisms with probiotic properties.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[<i>Blautia</i>—a new functional genus with potential probiotic properties?]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765908267980-dd731871-972c-4983-a13c-755f57e7547f/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1875796</link>
            <description><![CDATA[<p class="para" id="N65541"><i>Blautia</i> is a genus of anaerobic bacteria with probiotic characteristics that occur widely in the feces and intestines of mammals. Based on phenotypic and phylogenetic analyses, some species in the genera <i>Clostridium</i> and <i>Ruminococcus</i> have been reclassified as <i>Blautia</i>, so to date, there are 20 new species with valid published names in this genus. An extensive body of research has recently focused on the probiotic effects of this genus, such as biological transformation and its ability to regulate host health and alleviate metabolic syndrome. This article reviews the origin and biological characteristics of <i>Blautia</i> and the factors that affect its abundance and discusses its role in host health, thus laying a theoretical foundation for the development of new functional microorganisms with probiotic properties.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Harnessing machine learning for development of microbiome therapeutics]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765908257282-a284be0f-da1c-4a84-975f-ad241bb0c153/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1872323</link>
            <description><![CDATA[<p class="para" id="N65541">The last twenty years of seminal microbiome research has uncovered microbiota’s intrinsic relationship with human health. Studies elucidating the relationship between an unbalanced microbiome and disease are currently published daily. As such, microbiome big data have become a reality that provide a mine of information for the development of new therapeutics. Machine learning (ML), a branch of artificial intelligence, offers powerful techniques for big data analysis and prediction-making, that are out of reach of human intellect alone. This review will explore how ML can be applied for the development of microbiome-targeted therapeutics. A background on ML will be given, followed by a guide on where to find reliable microbiome big data. Existing applications and opportunities will be discussed, including the use of ML to discover, design, and characterize microbiome therapeutics. The use of ML to optimize advanced processes, such as 3D printing and <i>in silico</i> prediction of drug-microbiome interactions, will also be highlighted. Finally, barriers to adoption of ML in academic and industrial settings will be examined, concluded by a future outlook for the field.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Harnessing machine learning for development of microbiome therapeutics]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765908257282-a284be0f-da1c-4a84-975f-ad241bb0c153/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1872323</link>
            <description><![CDATA[<p class="para" id="N65541">The last twenty years of seminal microbiome research has uncovered microbiota’s intrinsic relationship with human health. Studies elucidating the relationship between an unbalanced microbiome and disease are currently published daily. As such, microbiome big data have become a reality that provide a mine of information for the development of new therapeutics. Machine learning (ML), a branch of artificial intelligence, offers powerful techniques for big data analysis and prediction-making, that are out of reach of human intellect alone. This review will explore how ML can be applied for the development of microbiome-targeted therapeutics. A background on ML will be given, followed by a guide on where to find reliable microbiome big data. Existing applications and opportunities will be discussed, including the use of ML to discover, design, and characterize microbiome therapeutics. The use of ML to optimize advanced processes, such as 3D printing and <i>in silico</i> prediction of drug-microbiome interactions, will also be highlighted. Finally, barriers to adoption of ML in academic and industrial settings will be examined, concluded by a future outlook for the field.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Harnessing
Endogenous Stimuli for Responsive Materials
in Theranostics]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765907392942-0fb6553e-2f5f-433b-8b6e-2a68e9af3940/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1021/acsnano.0c09115</link>
            <description><![CDATA[<p class="para" id="N65539"><div class="imageVideo"><img src="/dataresources/secured/content-1765907392942-0fb6553e-2f5f-433b-8b6e-2a68e9af3940/assets/nn0c09115_0015.jpg" alt=""/></div></p><p class="para" id="N65545">Materials that respond
to endogenous stimuli are being leveraged
to enhance spatiotemporal control in a range of biomedical applications
from drug delivery to diagnostic tools. The design of materials that
undergo morphological or chemical changes in response to specific
biological cues or pathologies will be an important area of research
for improving efficacies of existing therapies and imaging agents,
while also being promising for developing personalized theranostic
systems. Internal stimuli-responsive systems can be engineered across
length scales from nanometers to macroscopic and can respond to endogenous
signals such as enzymes, pH, glucose, ATP, hypoxia, redox signals,
and nucleic acids by incorporating synthetic bio-inspired moieties
or natural building blocks. This Review will summarize response mechanisms
and fabrication strategies used in internal stimuli-responsive materials
with a focus on drug delivery and imaging for a broad range of pathologies,
including cancer, diabetes, vascular disorders, inflammation, and
microbial infections. We will also discuss observed challenges, future
research directions, and clinical translation aspects of these responsive
materials.</p>]]></description>
            <pubDate><![CDATA[2021-02-08T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[SARS-CoV-2 tropism, entry, replication, and propagation: Considerations for drug discovery and development]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765906013711-8b15fda6-0add-4aaa-9ddd-528b798b6764/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009225</link>
            <description><![CDATA[<p class="para" id="N65539">Since the initial report of the novel Coronavirus Disease 2019 (COVID-19) emanating from Wuhan, China, Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has spread globally. While the effects of SARS-CoV-2 infection are not completely understood, there appears to be a wide spectrum of disease ranging from mild symptoms to severe respiratory distress, hospitalization, and mortality. There are no Food and Drug Administration (FDA)-approved treatments for COVID-19 aside from remdesivir; early efforts to identify efficacious therapeutics for COVID-19 have mainly focused on drug repurposing screens to identify compounds with antiviral activity against SARS-CoV-2 in cellular infection systems. These screens have yielded intriguing hits, but the use of nonhuman immortalized cell lines derived from non-pulmonary or gastrointestinal origins poses any number of questions in predicting the physiological and pathological relevance of these potential interventions. While our knowledge of this novel virus continues to evolve, our current understanding of the key molecular and cellular interactions involved in SARS-CoV-2 infection is discussed in order to provide a framework for developing the most appropriate in vitro toolbox to support current and future drug discovery efforts.</p>]]></description>
            <pubDate><![CDATA[2021-02-17T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Occurrence of various viruses and recent evidence of SARS-CoV-2 in wastewater systems]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765900806396-2a5191cf-5cf6-4dad-aaa5-86cda8d5dada/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.jhazmat.2021.125439</link>
            <description><![CDATA[<p class="para" id="N65540">Viruses are omnipresent and persistent in wastewater, which poses a risk to human health. In this review, we summarise the different qualitative and quantitative methods for virus analysis in wastewater and systematically discuss the spatial distribution and temporal patterns of various viruses (i.e., enteric viruses, Caliciviridae (Noroviruses (NoVs)), Picornaviridae (Enteroviruses (EVs)), Hepatitis A virus (HAV)), and Adenoviridae (Adenoviruses (AdVs))) in wastewater systems. Then we critically review recent SARS-CoV-2 studies to understand the ongoing COVID-19 pandemic through wastewater surveillance. SARS-CoV-2 genetic material has been detected in wastewater from France, the Netherlands, Australia, Italy, Japan, Spain, Turkey, India, Pakistan, China, and the USA. We then discuss the utility of wastewater-based epidemiology (WBE) to estimate the occurrence, distribution, and genetic diversity of these viruses and generate human health risk assessment. Finally, we not only promote the prevention of viral infectious disease transmission through wastewater but also highlight the potential use of WBE as an early warning system for public health assessment.</p><p class="para" id="N65543"><div class="section" id="fig0030"><div class="img"><div class="imgeVideo"><div class="img-fullscreenIcon" onClick="javascript:showImageContent('fig0030');"><img src="/public/images/journalImg/fullscreen.png"/></div><div class="imageVideo"><img src="/dataresources/secured/content-1765900806396-2a5191cf-5cf6-4dad-aaa5-86cda8d5dada/assets/ga1_lrg.jpg" alt=""/></div></div></div></div></p>]]></description>
            <pubDate><![CDATA[2021-02-19T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Intestinal Inflammation as a Dysbiosis of Energy Procurement: New Insights into an Old Topic]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765899091392-0bd01101-cea0-4a63-969c-660a5f27f473/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1880241</link>
            <description><![CDATA[<p class="para" id="N65541">Inflammatory bowel disease (IBD) coincides with profound shifts in microbiota and host metabolic energy supply and demand. The gastrointestinal epithelium is anatomically positioned to provide a selective barrier between the anaerobic luminal microbiota and host lamina propria, with the microbiota and epithelium participating in an intricate energy exchange necessary for homeostasis. Maintenance and restoration of the barrier requires high energy flux and places significant demands on available substrates to generate ATP. It is recently appreciated that components of the microbiota contribute significantly to a multitude of biochemical pathways within and outside of the mucosa. Decades-old studies have appreciated that byproducts of the microbiota provide essential sources of energy to the intestinal epithelium, especially the colon. More recent work has unveiled the existence of numerous microbial-derived metabolites that support energy procurement within the mucosa. It is now appreciated that disease-associated shifts in the microbiota, termed dysbiosis, places significant demands on energy acquisition within the mucosa. Here, we review the topic of host- and microbial-derived components that influence tissue energetics in health and during disease.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Intestinal Inflammation as a Dysbiosis of Energy Procurement: New Insights into an Old Topic]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765899091392-0bd01101-cea0-4a63-969c-660a5f27f473/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2021.1880241</link>
            <description><![CDATA[<p class="para" id="N65541">Inflammatory bowel disease (IBD) coincides with profound shifts in microbiota and host metabolic energy supply and demand. The gastrointestinal epithelium is anatomically positioned to provide a selective barrier between the anaerobic luminal microbiota and host lamina propria, with the microbiota and epithelium participating in an intricate energy exchange necessary for homeostasis. Maintenance and restoration of the barrier requires high energy flux and places significant demands on available substrates to generate ATP. It is recently appreciated that components of the microbiota contribute significantly to a multitude of biochemical pathways within and outside of the mucosa. Decades-old studies have appreciated that byproducts of the microbiota provide essential sources of energy to the intestinal epithelium, especially the colon. More recent work has unveiled the existence of numerous microbial-derived metabolites that support energy procurement within the mucosa. It is now appreciated that disease-associated shifts in the microbiota, termed dysbiosis, places significant demands on energy acquisition within the mucosa. Here, we review the topic of host- and microbial-derived components that influence tissue energetics in health and during disease.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Dual Nature of Type I Interferons in SARS-CoV-2-Induced Inflammation]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765862566173-bb7b5365-7ab0-4622-95fb-c6eeaa3b829b/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.it.2021.02.003</link>
            <description><![CDATA[<p class="para" id="N65540">Coronavirus disease 2019 (COVID-19) is an infectious disease caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The ability of our cells to secrete type I interferons (IFN-Is) is essential for the control of virus replication and for effective antiviral immune responses; for this reason, viruses have evolved the means to antagonize IFN-I. Inhibition of IFN-I production is pronounced in SARS-CoV-2 infection, which can impair the adaptive immune response and exacerbate inflammatory disease at late stages of infection. However, therapeutic boosting of IFN-I offers a narrow time window for efficacy and safety. Here, we discuss how limits placed on IFN-I by SARS-CoV-2 shape the immune response and whether this might be countered with therapeutic approaches and vaccine design.</p>]]></description>
            <pubDate><![CDATA[2021-02-12T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The rapidly evolving view of lysosomal storage diseases]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765861855360-ec91a847-365a-49d3-91b1-ac8c515e52cf/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202012836</link>
            <description><![CDATA[<p class="para" id="N65542">Lysosomal storage diseases are a group of metabolic disorders caused by deficiencies of several components of lysosomal function. Most commonly affected are lysosomal hydrolases, which are involved in the breakdown and recycling of a variety of complex molecules and cellular structures. The understanding of lysosomal biology has progressively improved over time. Lysosomes are no longer viewed as organelles exclusively involved in catabolic pathways, but rather as highly dynamic elements of the autophagic‐lysosomal pathway, involved in multiple cellular functions, including signaling, and able to adapt to environmental stimuli. This refined vision of lysosomes has substantially impacted on our understanding of the pathophysiology of lysosomal disorders. It is now clear that substrate accumulation triggers complex pathogenetic cascades that are responsible for disease pathology, such as aberrant vesicle trafficking, impairment of autophagy, dysregulation of signaling pathways, abnormalities of calcium homeostasis, and mitochondrial dysfunction. Novel technologies, in most cases based on high‐throughput approaches, have significantly contributed to the characterization of lysosomal biology or lysosomal dysfunction and have the potential to facilitate diagnostic processes, and to enable the identification of new therapeutic targets.</p><p class="para" id="N65541">In the last decade, our understanding of lysosomal storage diseases immensely improved. The current article comprehensively reviews recent advances in lysosomal storage diseases research and therapy development.<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1765861855360-ec91a847-365a-49d3-91b1-ac8c515e52cf/assets/EMMM-13-e12836-g004.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-01-18T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The rapidly evolving view of lysosomal storage diseases]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765861855360-ec91a847-365a-49d3-91b1-ac8c515e52cf/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202012836</link>
            <description><![CDATA[<p class="para" id="N65542">Lysosomal storage diseases are a group of metabolic disorders caused by deficiencies of several components of lysosomal function. Most commonly affected are lysosomal hydrolases, which are involved in the breakdown and recycling of a variety of complex molecules and cellular structures. The understanding of lysosomal biology has progressively improved over time. Lysosomes are no longer viewed as organelles exclusively involved in catabolic pathways, but rather as highly dynamic elements of the autophagic‐lysosomal pathway, involved in multiple cellular functions, including signaling, and able to adapt to environmental stimuli. This refined vision of lysosomes has substantially impacted on our understanding of the pathophysiology of lysosomal disorders. It is now clear that substrate accumulation triggers complex pathogenetic cascades that are responsible for disease pathology, such as aberrant vesicle trafficking, impairment of autophagy, dysregulation of signaling pathways, abnormalities of calcium homeostasis, and mitochondrial dysfunction. Novel technologies, in most cases based on high‐throughput approaches, have significantly contributed to the characterization of lysosomal biology or lysosomal dysfunction and have the potential to facilitate diagnostic processes, and to enable the identification of new therapeutic targets.</p><p class="para" id="N65541">In the last decade, our understanding of lysosomal storage diseases immensely improved. The current article comprehensively reviews recent advances in lysosomal storage diseases research and therapy development.<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1765861855360-ec91a847-365a-49d3-91b1-ac8c515e52cf/assets/EMMM-13-e12836-g004.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-01-18T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Considerations for mosquito microbiome research from the Mosquito Microbiome Consortium]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765850872285-7d4d9149-3a7f-4fb4-a76c-0976038e002c/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1186/s40168-020-00987-7</link>
            <description><![CDATA[<p class="para" id="Par1">In the past decade, there has been increasing interest in mosquito microbiome research, leading to large amounts of data on different mosquito species, with various underlying physiological characteristics, and from diverse geographical locations. However, guidelines and standardized methods for conducting mosquito microbiome research are lacking. To streamline methods in mosquito microbiome research and optimize data quality, reproducibility, and comparability, as well as facilitate data curation in a centralized location, we are establishing the Mosquito Microbiome Consortium, a collaborative initiative for the advancement of mosquito microbiome research. Our overall goal is to collectively work on unraveling the role of the mosquito microbiome in mosquito biology, while critically evaluating its potential for mosquito-borne disease control. This perspective serves to introduce the consortium and invite broader participation. It highlights the issues we view as most pressing to the community and proposes guidelines for conducting mosquito microbiome research. We focus on four broad areas in this piece: (1) sampling/experimental design for field, semi-field, or laboratory studies; (2) metadata collection; (3) sample processing, sequencing, and use of appropriate controls; and (4) data handling and analysis. We finally summarize current challenges and highlight future directions in mosquito microbiome research. We hope that this piece will spark discussions around this area of disease vector biology, as well as encourage careful considerations in the design and implementation of mosquito microbiome research.</p><p class="para" id="Par960">
<div class="imageVideo"><img src="/dataresources/secured/content-1765850872285-7d4d9149-3a7f-4fb4-a76c-0976038e002c/assets/40168_2020_987_MOESM1_ESM.mp4" alt=""/></div></p><div class="section" id="N65552"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65555">The online version contains supplementary material available at 10.1186/s40168-020-00987-7.</p></div>]]></description>
            <pubDate><![CDATA[2021-02-01T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Gut microbiota: impacts on gastrointestinal cancer immunotherapy]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765850208944-e3ec03dc-622e-4b8c-8463-fe193e794375/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1869504</link>
            <description><![CDATA[<p class="para" id="N65541">The association of gut microbiota with gastrointestinal carcinogenesis has been heavily investigated since the recent advance in sequencing technology. Accumulating evidence has revealed the critical roles of commensal microbes in cancer progression. Given by its importance, emerging studies have focussed on targeting microbiota to ameliorate therapeutic effectiveness. It is now clear that the microbial community is closely related to the efficacy of chemotherapy, while the correlation of microbiota with immunotherapy is much less studied. Herein, we review the up-to-date findings on the influence of gut microbiota on three common immunotherapies including adoptive cell transfer, immune checkpoint blockade, and CpG-oligodeoxynucleotide therapy. We then explore three microbiota-targeted strategies that may improve treatment efficacy, involving dietary intervention, probiotics supplementation, and fecal microbiota transplantation.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Gut microbiota: impacts on gastrointestinal cancer immunotherapy]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765850208944-e3ec03dc-622e-4b8c-8463-fe193e794375/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1869504</link>
            <description><![CDATA[<p class="para" id="N65541">The association of gut microbiota with gastrointestinal carcinogenesis has been heavily investigated since the recent advance in sequencing technology. Accumulating evidence has revealed the critical roles of commensal microbes in cancer progression. Given by its importance, emerging studies have focussed on targeting microbiota to ameliorate therapeutic effectiveness. It is now clear that the microbial community is closely related to the efficacy of chemotherapy, while the correlation of microbiota with immunotherapy is much less studied. Herein, we review the up-to-date findings on the influence of gut microbiota on three common immunotherapies including adoptive cell transfer, immune checkpoint blockade, and CpG-oligodeoxynucleotide therapy. We then explore three microbiota-targeted strategies that may improve treatment efficacy, involving dietary intervention, probiotics supplementation, and fecal microbiota transplantation.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Biocatalysis: Enzymatic Synthesis for Industrial Applications]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765850003307-ad1175bd-6871-4980-98a7-92cdbc408005/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.202006648</link>
            <description><![CDATA[<p class="para" id="N65541">Biocatalysis has found numerous applications in various fields as an alternative to chemical catalysis. The use of enzymes in organic synthesis, especially to make chiral compounds for pharmaceuticals as well for the flavors and fragrance industry, are the most prominent examples. In addition, biocatalysts are used on a large scale to make specialty and even bulk chemicals. This review intends to give illustrative examples in this field with a special focus on scalable chemical production using enzymes. It also discusses the opportunities and limitations of enzymatic syntheses using distinct examples and provides an outlook on emerging enzyme classes.</p><p class="para" id="N65540">Biocatalysis has developed into a mature technology for chemical and pharmaceutical synthesis as well as other areas where high selectivity and mild reaction conditions are required. This Review highlights recent achievements with a special focus on industrialized applications including the introduction of key performance indicators (KPIs) to judge the efficiency of enzymes.<div class="section"><div class="box" id="N65542"><div class="imageVideo"><img src="/dataresources/secured/content-1765850003307-ad1175bd-6871-4980-98a7-92cdbc408005/assets/ANIE-60-88-g058.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-08-17T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Genome-in-a-Box:
Building a Chromosome from the Bottom
Up]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765849657203-aac26907-dd50-4873-a665-063eb8a2c0de/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1021/acsnano.0c07397</link>
            <description><![CDATA[<p class="para" id="N65539"><div class="imageVideo"><img src="/dataresources/secured/content-1765849657203-aac26907-dd50-4873-a665-063eb8a2c0de/assets/nn0c07397_0005.jpg" alt=""/></div></p><p class="para" id="N65545">Chromosome structure and dynamics
are essential for life, as the
way that our genomes are spatially organized within cells is crucial
for gene expression, differentiation, and genome transfer to daughter
cells. There is a wide variety of methods available to study chromosomes,
ranging from live-cell studies to single-molecule biophysics, which
we briefly review. While these technologies have yielded a wealth
of data, such studies still leave a significant gap between top-down
experiments on live cells and bottom-up <i>in vitro</i> single-molecule
studies of DNA–protein interactions. Here, we introduce “genome-in-a-box”
(GenBox) as an alternative <i>in vitro</i> approach to build
and study chromosomes, which bridges this gap. The concept is to assemble
a chromosome from the bottom up by taking deproteinated genome-sized
DNA isolated from live cells and subsequently add purified DNA-organizing
elements, followed by encapsulation in cell-sized containers using
microfluidics. Grounded in the rationale of synthetic cell research,
the approach would enable to experimentally study emergent effects
at the global genome level that arise from the collective action of
local DNA-structuring elements. We review the various DNA-structuring
elements present in nature, from nucleoid-associated proteins and
SMC complexes to phase separation and macromolecular crowders. Finally,
we discuss how GenBox can contribute to several open questions on
chromosome structure and dynamics.</p>]]></description>
            <pubDate><![CDATA[2020-12-21T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Phospholipid ebb and flow makes mitochondria go]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765848505201-8950f9cf-75ba-4b1e-9990-63a0f94837ad/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1083/jcb.202003131</link>
            <description><![CDATA[<p class="para" id="N65540">In this review, Acoba et al. discuss the surprisingly complicated mechanisms, regulation, and functions of mitochondrial membrane building.</p><p class="para" id="N65539">Mitochondria, so much more than just being energy factories, also have the capacity to synthesize macromolecules including phospholipids, particularly cardiolipin (CL) and phosphatidylethanolamine (PE). Phospholipids are vital constituents of mitochondrial membranes, impacting the plethora of functions performed by this organelle. Hence, the orchestrated movement of phospholipids to and from the mitochondrion is essential for cellular integrity. In this review, we capture recent advances in the field of mitochondrial phospholipid biosynthesis and trafficking, highlighting the significance of interorganellar communication, intramitochondrial contact sites, and lipid transfer proteins in maintaining membrane homeostasis. We then discuss the physiological functions of CL and PE, specifically how they associate with protein complexes in mitochondrial membranes to support bioenergetics and maintain mitochondrial architecture.</p>]]></description>
            <pubDate><![CDATA[2020-07-02T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Bacterial nucleomodulins: A coevolutionary adaptation to the eukaryotic command center]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765846645140-398446c9-5a7c-4558-841d-8f71c80a9b8e/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009184</link>
            <description><![CDATA[<p class="para" id="N65539">Through long-term interactions with their hosts, bacterial pathogens have evolved unique arsenals of effector proteins that interact with specific host targets and reprogram the host cell into a permissive niche for pathogen proliferation. The targeting of effector proteins into the host cell nucleus for modulation of nuclear processes is an emerging theme among bacterial pathogens. These unique pathogen effector proteins have been termed in recent years as “nucleomodulins.” The first nucleomodulins were discovered in the phytopathogens <i>Agrobacterium</i> and <i>Xanthomonas</i>, where their nucleomodulins functioned as eukaryotic transcription factors or integrated themselves into host cell DNA to promote tumor induction, respectively. Numerous nucleomodulins were recently identified in mammalian pathogens. Bacterial nucleomodulins are an emerging family of pathogen effector proteins that evolved to target specific components of the host cell command center through various mechanisms. These mechanisms include: chromatin dynamics, histone modification, DNA methylation, RNA splicing, DNA replication, cell cycle, and cell signaling pathways. Nucleomodulins may induce short- or long-term epigenetic modifications of the host cell. In this extensive review, we discuss the current knowledge of nucleomodulins from plant and mammalian pathogens. While many nucleomodulins are already identified, continued research is instrumental in understanding their mechanisms of action and the role they play during the progression of pathogenesis. The continued study of nucleomodulins will enhance our knowledge of their effects on nuclear chromatin dynamics, protein homeostasis, transcriptional landscapes, and the overall host cell epigenome.</p><p class="para" id="N65542">Bacterial pathogens have evolved a repertoire of diverse effector proteins that are secreted or injected into the host cell cytosol, reprogramming the host cell into a more favorable environment. Many of these pathogens possess nuclear-targeted effector proteins (nucleomodulins) that modulate host cell gene expression without altering the cellular genomic sequence. By utilizing nucleomodulins obtained through evolution, pathogens can manipulate host cell gene regulation and alter host immune response to infection. Here, we provide a comprehensive review discussing a diverse array of nucleomodulins that target and modulate the host genome through interference with chromatin dynamics, histone modifications, regulation of transcription, interference of the cell cycle, and regulation of cell signaling pathways for immune response. This unique targeting of host cell gene regulation through bacterial nucleomodulins is an emerging theme and likely the tip of an iceberg regarding host–pathogen interactions at the level of the host command center.</p>]]></description>
            <pubDate><![CDATA[2021-01-21T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Three-dimensional chromatin in infectious disease—A role for gene regulation and pathogenicity?]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765840960569-6618dd97-d057-488a-af5a-ac6cf5253e32/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009207</link>
            <description><![CDATA[<p class="para" id="N65539">The recent Coronavirus Disease 2019 pandemic has once again reminded us the importance of understanding infectious diseases. One important but understudied area in infectious disease research is the role of nuclear architecture or the physical arrangement of the genome in the nucleus in controlling gene regulation and pathogenicity. Recent advances in research methods, such as Genome-wide chromosome conformation capture using high-throughput sequencing (Hi-C), have allowed for easier analysis of nuclear architecture and chromosomal reorganization in both the infectious disease agents themselves as well as in their host cells. This review will discuss broadly on what is known about nuclear architecture in infectious disease, with an emphasis on chromosomal reorganization, and briefly discuss what steps are required next in the field.</p><p class="para" id="N65542">In this review, we examine the current state of nuclear architecture in infectious diseases with an emphasis on chromosomal reorganization. Nuclear architecture plays an important role in regulation of transcription for several pathogens, as well as inflammatory responses in their host. Recent advances in technologies such as Hi-C have allowed in-depth studies of chromosomal reorganization during infectious disease development and provided insights into transcription mechanisms and pathogenicity. In addition, it has been demonstrated that pathogens can also affect/utilize the hosts nuclear architecture. These areas are heavily understudied in pathogens, and we hope this review will provide a comprehensive review on the current state of nuclear architecture in infectious diseases and provide an additional avenue for eradication efforts.</p>]]></description>
            <pubDate><![CDATA[2021-02-04T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Challenges and Strategies for High‐Energy Aqueous Electrolyte Rechargeable Batteries]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765840379248-02c13031-df47-4fd4-bf05-763983f4e76b/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.202004433</link>
            <description><![CDATA[<p class="para" id="N65541">Aqueous rechargeable batteries are becoming increasingly important to the development of renewable energy sources, because they promise to meet cost‐efficiency, energy and power demands for stationary applications. Over the past decade, efforts have been devoted to the improvement of electrode materials and their use in combination with highly concentrated aqueous electrolytes. Here the latest ground‐breaking advances in using such electrolytes to construct aqueous battery systems efficiently storing electrical energy, i.e., offering improved energy density, cyclability and safety, are highlighted. This Review aims to timely provide a summary of the strategies proposed so far to overcome the still existing hurdles limiting the present aqueous batteries technologies employing concentrated electrolytes. Emphasis is placed on aqueous batteries for lithium and post‐lithium chemistries, with potentially improved energy density, resulting from the unique advantages of concentrated electrolytes.</p><p class="para" id="N65540">
<b>A matter of concentration</b>: The latest ground‐breaking advances and strategies of using concentrated electrolyte for aqueous batteries, are discussed. Emphasis is placed on aqueous batteries for lithium and post‐lithium chemistries, with improved energy density, resulting from the unique properties of salt‐concentrated electrolytes.<div class="section"><div class="box" id="N65545"><div class="imageVideo"><img src="/dataresources/secured/content-1765840379248-02c13031-df47-4fd4-bf05-763983f4e76b/assets/ANIE-60-598-g015.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-07-16T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Molecular mechanisms and physiological functions of mitophagy]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765838930439-52e4334a-8a47-498e-9d3e-314f02420785/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/embj.2020104705</link>
            <description><![CDATA[<p class="para" id="N65542">Degradation of mitochondria via a selective form of autophagy, named mitophagy, is a fundamental mechanism conserved from yeast to humans that regulates mitochondrial quality and quantity control. Mitophagy is promoted via specific mitochondrial outer membrane receptors, or ubiquitin molecules conjugated to proteins on the mitochondrial surface leading to the formation of autophagosomes surrounding mitochondria. Mitophagy‐mediated elimination of mitochondria plays an important role in many processes including early embryonic development, cell differentiation, inflammation, and apoptosis. Recent advances in analyzing mitophagy <i>in vivo</i> also reveal high rates of steady‐state mitochondrial turnover in diverse cell types, highlighting the intracellular housekeeping role of mitophagy. Defects in mitophagy are associated with various pathological conditions such as neurodegeneration, heart failure, cancer, and aging, further underscoring the biological relevance. Here, we review our current molecular understanding of mitophagy, and its physiological implications, and discuss how multiple mitophagy pathways coordinately modulate mitochondrial fitness and populations.</p><p class="para" id="N65541">This review describes the conserved pathways for mitochondrial degradation via selective autophagy across species, and how multiple mitophagy pathways cooperate to modulate mitochondrial fitness and number in normal or disease physiology.
<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1765838930439-52e4334a-8a47-498e-9d3e-314f02420785/assets/EMBJ-40-e104705-g007.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2021-01-13T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Dissecting lipid metabolism alterations in SARS-CoV-2]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765838543180-af531394-2452-46ce-a654-88db40f3d025/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.plipres.2021.101092</link>
            <description><![CDATA[<p class="para" id="N65540">Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the cause of the COVID-19 pandemic that has infected over a hundred million people globally. There have been more than two million deaths recorded worldwide, with no end in sight until a widespread vaccination will be achieved. Current research has centred on different aspects of the virus interaction with cell surface receptors, but more needs to be done to further understand its mechanism of action in order to develop a targeted therapy and a method to control the spread of the virus. Lipids play a crucial role throughout the viral life cycle, and viruses are known to exploit lipid signalling and synthesis to affect host cell lipidome. Emerging studies using untargeted metabolomic and lipidomic approaches are providing new insight into the host response to COVID-19 infection. Indeed, metabolomic and lipidomic approaches have identified numerous circulating lipids that directly correlate to the severity of the disease, making lipid metabolism a potential therapeutic target. Circulating lipids play a key function in the pathogenesis of the virus and exert an inflammatory response. A better knowledge of lipid metabolism in the host-pathogen interaction will provide valuable insights into viral pathogenesis and to the development of novel therapeutic targets.</p>]]></description>
            <pubDate><![CDATA[2021-02-08T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Liquid–liquid phase separation in autophagy]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765833672689-96c39090-ae35-450f-afbb-5136412ed93b/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1083/jcb.202004062</link>
            <description><![CDATA[<p class="para" id="N65540">Zhang and colleagues summarize phase separation and transition in the assembly of autophagosome formation sites and triage of protein condensates for degradation.</p><p class="para" id="N65539">Liquid–liquid phase separation (LLPS) compartmentalizes and concentrates biomacromolecules into distinct condensates. Liquid-like condensates can transition into gel and solid states, which are essential for fulfilling their different functions. LLPS plays important roles in multiple steps of autophagy, mediating the assembly of autophagosome formation sites, acting as an unconventional modulator of TORC1-mediated autophagy regulation, and triaging protein cargos for degradation. Gel-like, but not solid, protein condensates can trigger formation of surrounding autophagosomal membranes. Stress and pathological conditions cause aberrant phase separation and transition of condensates, which can evade surveillance by the autophagy machinery. Understanding the mechanisms underlying phase separation and transition will provide potential therapeutic targets for protein aggregation diseases.</p>]]></description>
            <pubDate><![CDATA[2020-06-30T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Prospects of Coupled Organic–Inorganic Nanostructures for Charge and Energy Transfer Applications]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765822300685-24b67362-6cba-46b8-bc21-25608af2c66a/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.201916402</link>
            <description><![CDATA[<p class="para" id="N65541">We review the field of organic–inorganic nanocomposites with a focus on materials that exhibit a significant degree of electronic coupling across the hybrid interface. These nanocomposites undergo a variety of charge and energy transfer processes, enabling optoelectronic applications in devices which exploit singlet fission, triplet energy harvesting, photon upconversion or hot charge carrier transfer. We discuss the physical chemistry of the most common organic and inorganic components. Based on those we derive synthesis and assembly strategies and design criteria on material and device level with a focus on photovoltaics, spin memories or optical upconverters. We conclude that future research in the field should be directed towards an improved understanding of the binding motif and molecular orientation at the hybrid interface.</p><p class="para" id="N65540">This Review provides an overview of the field of organic–inorganic nanocomposites with a focus on materials that exhibit a significant degree of electronic coupling across the hybrid interface. The characteristic properties of these nanocomposites pave the way to potential optoelectronic applications in devices which exploit singlet fission, triplet energy harvesting, photon upconversion or hot charge carrier transfer.<div class="section"><div class="box" id="N65542"><div class="imageVideo"><img src="/dataresources/secured/content-1765822300685-24b67362-6cba-46b8-bc21-25608af2c66a/assets/ANIE-60-1152-g014.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-09-17T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Interferon regulatory factor 1 (IRF1) and anti-pathogen innate immune responses]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765819655926-2a93990f-c5fb-42c1-a63d-ad085873454d/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009220</link>
            <description><![CDATA[<p class="para" id="N65539">The eponymous member of the interferon regulatory factor (IRF) family, IRF1, was originally identified as a nuclear factor that binds and activates the promoters of type I interferon genes. However, subsequent studies using genetic knockouts or RNAi-mediated depletion of IRF1 provide a much broader view, linking IRF1 to a wide range of functions in protection against invading pathogens. Conserved throughout vertebrate evolution, IRF1 has been shown in recent years to mediate constitutive as well as inducible host defenses against a variety of viruses. Fine-tuning of these ancient IRF1-mediated host defenses, and countering strategies by pathogens to disarm IRF1, play crucial roles in pathogenesis and determining the outcome of infection.</p>]]></description>
            <pubDate><![CDATA[2021-01-21T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Chemical Modification of Reducing End‐Groups in Cellulose Nanocrystals]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765799603673-ee218027-bbac-49af-ad78-76f44f13b87f/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1002/anie.202002433</link>
            <description><![CDATA[<p class="para" id="N65541">Native plant cellulose has an intrinsic supramolecular structure. Consequently, it can be isolated as nanocellulose species, which can be utilized as building blocks for renewable nanomaterials. The structure of cellulose also permits its end‐wise modification, i.e., chemical reactions exclusively on one end of a cellulose chain or a nanocellulose particle. The premises for end‐wise modification have been known for decades. Nevertheless, different approaches for the reactions have emerged only recently, because of formidable synthetic and analytical challenges associated with the issue, including the adverse reactivity of the cellulose reducing end and the low abundance of newly introduced functionalities. This Review gives a full account of the scientific underpinnings and challenges related to end‐wise modification of cellulose nanocrystals. Furthermore, we present how the chemical modification of cellulose nanocrystal ends may be applied to directed assembly, resulting in numerous possibilities for the construction of new materials, such as responsive liquid crystal templates and composites with tailored interactions.</p><p class="para" id="N65540">Topochemical modifications at the reducing end of nanocellulose are a new trend in cellulose materials research. The chemistry is aldehyde‐specific and exploits the inherent directionality of the chains in the cellulose I crystal bearing aldehyde groups exclusively on one end. This Review discusses challenges related to end‐specific modifications and highlights the opportunities for nanocellulose materials.<div class="section"><div class="box" id="N65542"><div class="imageVideo"><img src="/dataresources/secured/content-1765799603673-ee218027-bbac-49af-ad78-76f44f13b87f/assets/ANIE-60-66-g019.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-09-09T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Polymeric nanoparticle vaccines to combat emerging and pandemic threats]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765799170241-d106e8c1-f09f-4b76-8335-3dc3d2fa44f7/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.biomaterials.2020.120597</link>
            <description><![CDATA[<p class="para" id="N65540">Subunit vaccines are more advantageous than live attenuated vaccines in terms of safety and scale-up manufacture. However, this often comes as a trade-off to their efficacy. Over the years, polymeric nanoparticles have been developed to improve vaccine potency, by engineering their physicochemical properties to incorporate multiple immunological cues to mimic pathogenic microbes and viruses. This review covers recent advances in polymeric nanostructures developed toward particulate vaccines. It focuses on the impact of microbe mimicry (e.g. size, charge, hydrophobicity, and surface chemistry) on modulation of the nanoparticles’ delivery, trafficking, and targeting antigen-presenting cells to elicit potent humoral and cellular immune responses. This review also provides up-to-date progresses on rational designs of a wide variety of polymeric nanostructures that are loaded with antigens and immunostimulatory molecules, ranging from particles, micelles, nanogels, and polymersomes to advanced core-shell structures where polymeric particles are coated with lipids, cell membranes, or proteins.</p><p class="para" id="N65543"><div class="section" id="undfig1"><div class="img"><div class="imgeVideo"><div class="img-fullscreenIcon" onClick="javascript:showImageContent('undfig1');"><img src="/public/images/journalImg/fullscreen.png"/></div><div class="imageVideo"><img src="/dataresources/secured/content-1765799170241-d106e8c1-f09f-4b76-8335-3dc3d2fa44f7/assets/fx1_lrg.jpg" alt=""/></div></div></div></div></p>]]></description>
            <pubDate><![CDATA[2020-12-10T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Fruitful Neutralizing Antibody Pipeline Brings Hope To Defeat SARS-Cov-2]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765799114902-f2090635-e832-4182-82e6-fb0a1f4a6a77/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.tips.2020.07.004</link>
            <description><![CDATA[<p class="para" id="N65540">With the recent spread of severe acute respiratory syndrome coronavirus (SARS-CoV-2)_ infecting &gt;16 million people worldwide as of 28 July 2020, causing &gt;650 000 deaths, there is a desperate need for therapeutic agents and vaccines. Building on knowledge of previous outbreaks of SARS-CoV-1 and Middle East respiratory syndrome (MERS), the development of therapeutic antibodies and vaccines against coronavirus disease 2019 (COVID-19) is taking place at an unprecedented speed. Current efforts towards the development of neutralizing antibodies against COVID-19 are summarized. We also highlight the importance of a fruitful antibody development pipeline to combat the potential escape plans of SARS-CoV-2, including somatic mutations and antibody-dependent enhancement (ADE).</p>]]></description>
            <pubDate><![CDATA[2020-07-31T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Recovery scenario and immunity in COVID-19 disease: A new strategy to predict the potential of reinfection]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765798806527-5501a64e-d6b1-411f-bea4-8b4acb19410b/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1016/j.jare.2020.12.013</link>
            <description><![CDATA[<div class="section" id="f0025"><div class="img"><div class="imgeVideo"><div class="img-fullscreenIcon" onClick="javascript:showImageContent('f0025');"><img src="/public/images/journalImg/fullscreen.png"/></div><div class="imageVideo"><img src="/dataresources/secured/content-1765798806527-5501a64e-d6b1-411f-bea4-8b4acb19410b/assets/ga1.jpg" alt=""/></div></div></div></div><div class="section" id="N65540"><h3 class="BHead" id="nov000-1">Background</h3><p class="para" id="N65543">The recent ongoing outbreak of coronavirus disease 2019 (COVID-19), still is an unsolved problem with a growing rate of infected cases and mortality worldwide. The novel coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is targeting the angiotensin-converting enzyme 2 (ACE2) receptor and mostly causes a respiratory illness. Although acquired and resistance immunity is one of the most important aspects of alleviating the trend of the current pandemic; however, there is still a big gap of knowledge regarding the infection process, immunopathogenesis, recovery, and reinfection.</p></div><div class="section" id="N65545"><h3 class="BHead" id="nov000-2">Aim of Review</h3><p class="para" id="N65548">To answer the questions regarding “the potential and probability of reinfection in COVID-19 infected cases” or “the efficiency and duration of SARS-CoV-2 infection-induced immunity against reinfection” we critically evaluated the current reports on SARS-CoV-2 immunity and reinfection with special emphasis on comparative studies using animal models that generalize their finding about protection and reinfection. Also, the contribution of humoral immunity in the process of COVID-19 recovery and the role of ACE2 in virus infectivity and pathogenesis has been discussed. Furthermore, innate and cellular immunity and inflammatory responses in the disease and recovery conditions are reviewed and an overall outline of immunologic aspects of COVID-19 progression and recovery in three different stages are presented. Finally, we categorized the infected cases into four different groups based on the acquired immunity and the potential for reinfection.</p></div><div class="section" id="N65550"><h3 class="BHead" id="nov000-3">Key Scientific Concepts of Review</h3><p class="para" id="N65553">In this review paper, we proposed a new strategy to predict the potential of reinfection in each identified category. This classification may help to distribute resources more meticulously to determine: who needs to be serologically tested for SARS-CoV-2 neutralizing antibodies, what percentage of the population is immune to the virus, and who needs to be vaccinated.</p></div>]]></description>
            <pubDate><![CDATA[2021-01-05T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Understanding the host-microbe interactions using metabolic modeling]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765789132961-8eb792f7-32d0-4f55-a06a-a77e734d8bf2/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1186/s40168-020-00955-1</link>
            <description><![CDATA[<p class="para" id="Par1">The human gut harbors an enormous number of symbiotic microbes, which is vital for human health. However, interactions within the complex microbiota community and between the microbiota and its host are challenging to elucidate, limiting development in the treatment for a variety of diseases associated with microbiota dysbiosis. Using in silico simulation methods based on flux balance analysis, those interactions can be better investigated. Flux balance analysis uses an annotated genome-scale reconstruction of a metabolic network to determine the distribution of metabolic fluxes that represent the complete metabolism of a bacterium in a certain metabolic environment such as the gut. Simulation of a set of bacterial species in a shared metabolic environment can enable the study of the effect of numerous perturbations, such as dietary changes or addition of a probiotic species in a personalized manner. This review aims to introduce to experimental biologists the possible applications of flux balance analysis in the host-microbiota interaction field and discusses its potential use to improve human health.</p><p class="para" id="Par2">
<div class="imageVideo"><img src="/dataresources/secured/content-1765789132961-8eb792f7-32d0-4f55-a06a-a77e734d8bf2/assets/40168_2020_955_MOESM1_ESM.mp4" alt=""/></div></p><div class="section" id="N65553"><h3 class="BHead" id="nov000-1">Supplementary Information</h3><p class="para" id="N65556">The online version contains supplementary material available at 10.1186/s40168-020-00955-1.</p></div>]]></description>
            <pubDate><![CDATA[2021-01-20T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The Sporobiota of the Human Gut]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765780849696-0c7ca01c-cd99-4f50-a388-8c40f45b2a72/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1863134</link>
            <description><![CDATA[<p class="para" id="N65541">The human gut microbiome is a diverse and complex ecosystem that plays a critical role in health and disease. The composition of the gut microbiome has been well studied across all stages of life. In recent years, studies have investigated the production of endospores by specific members of the gut microbiome. An endospore is a tough, dormant structure formed by members of the Firmicutes phylum, which allows for greater resistance to otherwise inhospitable conditions. This innate resistance has consequences for human health and disease, as well as in biotechnology. In particular, the formation of endospores is strongly linked to antibiotic resistance and the spread of antibiotic resistance genes, also known as the resistome. The term sporobiota has been used to define the spore-forming cohort of a microbial community. In this review, we present an overview of the current knowledge of the sporobiota in the human gut. We discuss the development of the sporobiota in the infant gut and the perinatal factors that may have an effect on vertical transmission from mother to infant. Finally, we examine the sporobiota of critically important food sources for the developing infant, breast milk and powdered infant formula.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[The Sporobiota of the Human Gut]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765780849696-0c7ca01c-cd99-4f50-a388-8c40f45b2a72/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1863134</link>
            <description><![CDATA[<p class="para" id="N65541">The human gut microbiome is a diverse and complex ecosystem that plays a critical role in health and disease. The composition of the gut microbiome has been well studied across all stages of life. In recent years, studies have investigated the production of endospores by specific members of the gut microbiome. An endospore is a tough, dormant structure formed by members of the Firmicutes phylum, which allows for greater resistance to otherwise inhospitable conditions. This innate resistance has consequences for human health and disease, as well as in biotechnology. In particular, the formation of endospores is strongly linked to antibiotic resistance and the spread of antibiotic resistance genes, also known as the resistome. The term sporobiota has been used to define the spore-forming cohort of a microbial community. In this review, we present an overview of the current knowledge of the sporobiota in the human gut. We discuss the development of the sporobiota in the infant gut and the perinatal factors that may have an effect on vertical transmission from mother to infant. Finally, we examine the sporobiota of critically important food sources for the developing infant, breast milk and powdered infant formula.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Mechanisms of small cell lung cancer metastasis]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765769338680-cb1adcbf-1a70-4219-8420-11790e88ce17/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.15252/emmm.202013122</link>
            <description><![CDATA[<p class="para" id="N65542">Metastasis is a major cause of morbidity and mortality in cancer patients. However, the molecular and cellular mechanisms underlying the ability of cancer cells to metastasize remain relatively poorly understood. Among all solid tumors, small cell lung cancer (SCLC) has remarkable metastatic proclivity, with a majority of patients diagnosed with metastatic disease. Our understanding of SCLC metastasis has been hampered for many years by the paucity of material from primary tumors and metastases, as well as the lack of faithful pre‐clinical models. Here, we review recent advances that are helping circumvent these limitations. These advances include methods that employ circulating tumor cells from the blood of SCLC patients and the development of diverse genetically engineered mouse models of metastatic SCLC. New insights into the cellular mechanisms of SCLC metastasis include observations of cell fate changes associated with increased metastatic ability. Ongoing studies on cell migration and organ tropism promise to expand our understanding of SCLC metastasis. Ultimately, a better molecular understanding of metastatic phenotypes may be translated into new therapeutic options to limit metastatic spread and treat metastatic SCLC.</p><p class="para" id="N65541">Small cell lung cancer (SCLC) is highly metastatic, but rare resections of SCLC tumors and metastases have hampered our understanding of SCLC progression. This review offers a comprehensive overview of recent advances on models and mechanisms of SCLC metastasis.
<div class="section"><div class="box" id="N65543"><div class="imageVideo"><img src="/dataresources/secured/content-1765769338680-cb1adcbf-1a70-4219-8420-11790e88ce17/assets/EMMM-13-e13122-g003.jpg" alt=""/></div></div></div>
</p>]]></description>
            <pubDate><![CDATA[2020-12-09T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The genetic proteome: Using genetics to inform the proteome of mycobacterial pathogens]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765768281409-b5469bfb-a278-4e7c-adc0-eacece4c0888/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009124</link>
            <description><![CDATA[<p class="para" id="N65539">Mycobacterial pathogens pose a sustained threat to human health. There is a critical need for new diagnostics, therapeutics, and vaccines targeting both tuberculous and nontuberculous mycobacterial species. Understanding the basic mechanisms used by diverse mycobacterial species to cause disease will facilitate efforts to design new approaches toward detection, treatment, and prevention of mycobacterial disease. Molecular, genetic, and biochemical approaches have been widely employed to define fundamental aspects of mycobacterial physiology and virulence. The recent expansion of genetic tools in mycobacteria has further increased the accessibility of forward genetic approaches. Proteomics has also emerged as a powerful approach to further our understanding of diverse mycobacterial species. Detection of large numbers of proteins and their modifications from complex mixtures of mycobacterial proteins is now routine, with efforts of quantification of these datasets becoming more robust. In this review, we discuss the “genetic proteome,” how the power of genetics, molecular biology, and biochemistry informs and amplifies the quality of subsequent analytical approaches and maximizes the potential of hypothesis-driven mycobacterial research. Published proteomics datasets can be used for hypothesis generation and effective post hoc supplementation to experimental data. Overall, we highlight how the integration of proteomics, genetic, molecular, and biochemical approaches can be employed successfully to define fundamental aspects of mycobacterial pathobiology.</p>]]></description>
            <pubDate><![CDATA[2021-01-07T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The early life education of the immune system: Moms, microbes and (missed) opportunities]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765767939540-35978744-a5bc-48f2-b59b-ec5bca3b5f5a/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1824564</link>
            <description><![CDATA[<p class="para" id="N65541">The early life immune system is characterized by unique developmental milestones. Functionally diverse immune cells arise from distinct waves of hematopoietic stem cells, a phenomenon referred to as ‘layered’ immunity. This stratified development of immune cells extends to lineages of both innate and adaptive cells. The defined time window for the development of these immune cells lends itself to the influence of specific exposures typical of the early life period. The perinatal immune system develops in a relatively sterile fetal environment but emerges into one filled with a multitude of antigenic encounters. A major burden of this comes in the form of the microbiota that is being newly established at mucosal surfaces of the newborn. Accumulating evidence suggests that early life microbial exposures, including those arising <i>in utero</i>, can imprint long-lasting changes in the offspring’s immune system and determine disease risk throughout life. In this review, I highlight unique features of early life immunity and explore the role of intestinal bacteria in educating the developing immune system.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[The early life education of the immune system: Moms, microbes and (missed) opportunities]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765767939540-35978744-a5bc-48f2-b59b-ec5bca3b5f5a/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1824564</link>
            <description><![CDATA[<p class="para" id="N65541">The early life immune system is characterized by unique developmental milestones. Functionally diverse immune cells arise from distinct waves of hematopoietic stem cells, a phenomenon referred to as ‘layered’ immunity. This stratified development of immune cells extends to lineages of both innate and adaptive cells. The defined time window for the development of these immune cells lends itself to the influence of specific exposures typical of the early life period. The perinatal immune system develops in a relatively sterile fetal environment but emerges into one filled with a multitude of antigenic encounters. A major burden of this comes in the form of the microbiota that is being newly established at mucosal surfaces of the newborn. Accumulating evidence suggests that early life microbial exposures, including those arising <i>in utero</i>, can imprint long-lasting changes in the offspring’s immune system and determine disease risk throughout life. In this review, I highlight unique features of early life immunity and explore the role of intestinal bacteria in educating the developing immune system.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Efficacy and safety of fecal microbiota transplantation for the treatment of diseases other than <i>Clostridium difficile</i> infection: a systematic review and meta-analysis]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765767742527-eb3d6fa1-b2ec-4832-916c-7559bfe56368/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1854640</link>
            <description><![CDATA[<p class="para" id="N65541">The intestinal microbiome has been identified as a key modifier for a variety of health conditions. Fecal Microbiota Transplantation (FMT) has emerged as a fast, safe, and effective means by which to modify the intestinal microbiome and potentially treat a variety of health conditions. Despite extensive research of FMT for CDI, there is a lack of clarity informed by systematic synthesis of data regarding the safety and efficacy of FMT for other health conditions. This systematic review used PRISMA guidelines and was prospectively registered with PROSPERO (CRD42018104243). In March 2020, a search of MEDLINE, EMBASE, and PsycINFO was conducted. We identified 26 eligible studies. A meta-analysis of FMT for active Ulcerative Colitis (UC) showed that FMT significantly improved rates of clinical remission (OR = 3.634, 95% CI = 1.940 to 6.808, I<sup>2</sup> = 0%, <i>p</i> &lt; .001), clinical response (OR = 2.634, 95% CI = 1.441 to 4.815, I<sup>2</sup> = 33%, <i>p</i> = .002) and endoscopic remission (OR = 4.431, 95% CI = 1.901 to 10.324, I<sup>2</sup> = 0%, <i>p</i> = .001). With respect to Irritable Bowel Syndrome, a meta-analysis showed no significant change in symptoms following FMT (<i>p</i> = .739). Hepatic disorders, metabolic syndrome, and antibiotic-resistant organisms were conditions with emerging data on FMT. Serious adverse events (AE) were more often reported in control group participants (n = 43) compared with FMT group participants (n = 26). There were similar rates of mild to moderate AE in both groups. Preliminary data suggest that FMT is a potentially safe, well-tolerated and efficacious treatment for certain conditions other than CDI, with evidence for active UC being the most compelling.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Etiology of lactic acidosis in malaria]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765767248260-907f9e9d-0355-4c60-8101-815d295b7c55/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009122</link>
            <description><![CDATA[<p class="para" id="N65539">Lactic acidosis and hyperlactatemia are common metabolic disturbances in patients with severe malaria. Lactic acidosis causes physiological adverse effects, which can aggravate the outcome of malaria. Despite its clear association with mortality in malaria patients, the etiology of lactic acidosis is not completely understood. In this review, the possible contributors to lactic acidosis and hyperlactatemia in patients with malaria are discussed. Both increased lactate production and impaired lactate clearance may play a role in the pathogenesis of lactic acidosis. The increased lactate production is caused by several factors, including the metabolism of intraerythrocytic <i>Plasmodium</i> parasites, aerobic glycolysis by activated immune cells, and an increase in anaerobic glycolysis in hypoxic cells and tissues as a consequence of parasite sequestration and anemia. Impaired hepatic and renal lactate clearance, caused by underlying liver and kidney disease, might further aggravate hyperlactatemia. Multiple factors thus participate in the etiology of lactic acidosis in malaria, and further investigations are required to fully understand their relative contributions and the consequences of this major metabolic disturbance.</p>]]></description>
            <pubDate><![CDATA[2021-01-07T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[<i>Onchocerca volvulus</i> and epilepsy: A comprehensive review using the Bradford Hill criteria for causation]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765766644943-3f20b0ac-8ae2-4264-b920-f84343ec3d2c/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0008965</link>
            <description><![CDATA[<div class="section" id="sec001"><h3 class="BHead" id="nov000-1">Background</h3><p class="para" id="N65543">The possibility that onchocerciasis may cause epilepsy has been suggested for a long time, but thus far, an etiological link has not been universally accepted. The objective of this review is to critically appraise the relationship between <i>Onchocerca volvulus</i> and epilepsy and subsequently apply the Bradford Hill criteria to further evaluate the likelihood of a causal association.</p></div><div class="section" id="sec002"><h3 class="BHead" id="nov000-2">Methods</h3><p class="para" id="N65552">PubMed and gray literature published until September 15, 2020, were searched and findings from original research were synthesized. Adherence to the 9 Bradford Hill criteria in the context of onchocerciasis and epilepsy was determined to assess whether the criteria are met to strengthen the evidence base for a causal link between infection with <i>O</i>. <i>volvulus</i> and epilepsy, including the nodding syndrome.</p></div><div class="section" id="sec003"><h3 class="BHead" id="nov000-3">Results</h3><p class="para" id="N65564">Onchocerciasis as a risk factor for epilepsy meets the following Bradford Hill criteria for causality: strength of the association, consistency, temporality, and biological gradient. There is weaker evidence supporting causality based on the specificity, plausibility, coherence, and analogy criteria. There is little experimental evidence. Considering the Bradford Hill criteria, available data suggest that under certain conditions (high microfilarial load, timing of infection, and perhaps genetic predisposition), onchocerciasis is likely to cause epilepsy including nodding and Nakalanga syndromes.</p></div><div class="section" id="sec004"><h3 class="BHead" id="nov000-4">Conclusion</h3><p class="para" id="N65570">Applying the Bradford Hill criteria suggests consistent epidemiological evidence that <i>O</i>. <i>volvulus</i> infection is a trigger of epilepsy. However, the pathophysiological mechanisms responsible for seizure induction still need to be elucidated.</p></div><p class="para" id="N65542">There is growing epidemiological evidence that an infection with <i>Onchocerca volvulus</i> (the parasite causing onchocerciasis or river blindness) can trigger epilepsy, including nodding and Nakalanga syndromes. We studied the association between onchocerciasis and epilepsy using previously proposed criteria for causality and found strong arguments in favor of a causal relationship. The risk for children to develop epilepsy seems to be determined by the <i>O</i>. <i>volvulus</i> microfilarial load. However, the mechanism by which the <i>O</i>. <i>volvulus</i> parasite is able to trigger seizures remains to be elucidated. This form of epilepsy, called onchocerciasis-associated epilepsy (OAE), is an important public health problem in onchocerciasis-endemic regions with nonexistent or suboptimal onchocerciasis elimination programs. OAE is often characterized by sudden seizure onset in previously healthy children, between 3 to 18 years, without any other obvious cause of epilepsy. On the basis of the findings presented in this paper, it appears that onchocerciasis control may be able to prevent OAE. This further highlights the importance to eliminate onchocerciasis, particularly in areas with a high burden of epilepsy.</p>]]></description>
            <pubDate><![CDATA[2021-01-07T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The aryl hydrocarbon receptor as a mediator of host-microbiota interplay]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765762652047-bb796482-aa88-4e29-9f0e-ce714ff825ad/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1859812</link>
            <description><![CDATA[<p class="para" id="N65541">Increasing evidence suggests a significant role for microbiota dependent metabolites and co-metabolites, acting as aryl hydrocarbon receptor (AHR) ligands, to facilitate bidirectional communication between the host and the microbiota and thus modulate physiology. Such communication is particularly evident within the gastrointestinal tract. Through binding to or activating the AHR, these metabolites play fundamental roles in various physiological processes and likely contribute to the maintenance of intestinal homeostasis. In recent years, tryptophan metabolites were screened to identify physiologically relevant AHR ligands or activators. The discovery of specific microbiota-derived indole-based metabolites as AHR ligands may provide insight concerning how these metabolites affect interactions between gut microbiota and host intestinal homeostasis and how this relates to chronic GI disease and overall health. A greater understanding of the mechanisms that modulate the production of such metabolites and associated AHR activity may be utilized to effectively treat inflammatory diseases and promote human health. Here, we review microbiota-derived AHR ligands generated from tryptophan that modulate host-gut microbiota interactions and discuss possible intervention strategies for potential therapies in the future.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[The aryl hydrocarbon receptor as a mediator of host-microbiota interplay]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765762652047-bb796482-aa88-4e29-9f0e-ce714ff825ad/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1859812</link>
            <description><![CDATA[<p class="para" id="N65541">Increasing evidence suggests a significant role for microbiota dependent metabolites and co-metabolites, acting as aryl hydrocarbon receptor (AHR) ligands, to facilitate bidirectional communication between the host and the microbiota and thus modulate physiology. Such communication is particularly evident within the gastrointestinal tract. Through binding to or activating the AHR, these metabolites play fundamental roles in various physiological processes and likely contribute to the maintenance of intestinal homeostasis. In recent years, tryptophan metabolites were screened to identify physiologically relevant AHR ligands or activators. The discovery of specific microbiota-derived indole-based metabolites as AHR ligands may provide insight concerning how these metabolites affect interactions between gut microbiota and host intestinal homeostasis and how this relates to chronic GI disease and overall health. A greater understanding of the mechanisms that modulate the production of such metabolites and associated AHR activity may be utilized to effectively treat inflammatory diseases and promote human health. Here, we review microbiota-derived AHR ligands generated from tryptophan that modulate host-gut microbiota interactions and discuss possible intervention strategies for potential therapies in the future.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Microbial adaptation to the healthy and inflamed gut environments]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765762573501-249aa3be-001d-43c1-83a0-4aa98c9b1e47/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1857505</link>
            <description><![CDATA[<p class="para" id="N65541">There are 100 trillion diverse bacterial residents in the mammalian gut. Commensal bacterial species/strains cooperate and compete with each other to establish a well-balanced community, crucial for the maintenance of host health. Pathogenic bacteria hijack cooperative mechanisms or use strategies to evade competitive mechanisms to establish infection. Moreover, pathogenic bacteria cause marked environmental changes in the gut, such as the induction of inflammation, which fosters the selective growth of pathogens. In this review, we summarize the latest findings concerning the mechanisms by which commensal bacterial species/strains colonize the gut through cooperative or competitive behaviors. We also review the mechanisms by which pathogenic bacteria adapt to the inflamed gut and thrive at the expense of commensal bacteria. The understanding of bacterial adaptation to the healthy and the inflamed gut may provide new bacteria-targeted therapeutic approaches that selectively promote the expansion of beneficial commensal bacteria or limit the growth of pathogenic bacteria.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Microbial adaptation to the healthy and inflamed gut environments]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765762573501-249aa3be-001d-43c1-83a0-4aa98c9b1e47/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1857505</link>
            <description><![CDATA[<p class="para" id="N65541">There are 100 trillion diverse bacterial residents in the mammalian gut. Commensal bacterial species/strains cooperate and compete with each other to establish a well-balanced community, crucial for the maintenance of host health. Pathogenic bacteria hijack cooperative mechanisms or use strategies to evade competitive mechanisms to establish infection. Moreover, pathogenic bacteria cause marked environmental changes in the gut, such as the induction of inflammation, which fosters the selective growth of pathogens. In this review, we summarize the latest findings concerning the mechanisms by which commensal bacterial species/strains colonize the gut through cooperative or competitive behaviors. We also review the mechanisms by which pathogenic bacteria adapt to the inflamed gut and thrive at the expense of commensal bacteria. The understanding of bacterial adaptation to the healthy and the inflamed gut may provide new bacteria-targeted therapeutic approaches that selectively promote the expansion of beneficial commensal bacteria or limit the growth of pathogenic bacteria.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Serrated neoplasia in the colorectum: gut microbiota and molecular pathways]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765762178543-9e803581-716e-4446-804f-540281f76b26/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1863135</link>
            <description><![CDATA[<p class="para" id="N65541">Colorectal cancer (CRC) is a heterogeneous disease with different gene expression patterns. There are two major colorectal carcinogenesis pathways: conventional adenoma-carcinoma pathway and alternative serrated neoplasia pathway. Apart from the conventional pathway that is typically initiated by characteristic <i>APC</i> mutation and chromosomal instability, the serrated neoplasia pathway is mainly characterized by mutations of <i>BRAF</i> or <i>KRAS</i>, microsatellite instability (MSI), and CpG island methylator phenotype (CIMP). Despite the malignant potential of serrated lesions, they can be easily overlooked during endoscopy screening and even in pathological assessment due to its anatomical location, morphology, and histological features. It has been shown that environmental factors especially the gut microbial composition play a key role in CRC pathogenesis. Thus, the preferential localization of serrated lesions in specific intestine areas suggest that niche-specific microbiota composition might intertwined with host genetic perturbations during the development of serrated lesions. Although serrated lesions and conventional adenomas are biologically different, most studies have focused on conventional adenomas, while the pathophysiology and role of microorganisms in the development of serrated lesions remain elusive. In this review, we discuss on the role of gut microbiota in the serrated neoplasia pathway of colorectal carcinogenesis and its specific clinical and molecular features, and summarize the potential mechanisms involved.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Serrated neoplasia in the colorectum: gut microbiota and molecular pathways]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765762178543-9e803581-716e-4446-804f-540281f76b26/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/19490976.2020.1863135</link>
            <description><![CDATA[<p class="para" id="N65541">Colorectal cancer (CRC) is a heterogeneous disease with different gene expression patterns. There are two major colorectal carcinogenesis pathways: conventional adenoma-carcinoma pathway and alternative serrated neoplasia pathway. Apart from the conventional pathway that is typically initiated by characteristic <i>APC</i> mutation and chromosomal instability, the serrated neoplasia pathway is mainly characterized by mutations of <i>BRAF</i> or <i>KRAS</i>, microsatellite instability (MSI), and CpG island methylator phenotype (CIMP). Despite the malignant potential of serrated lesions, they can be easily overlooked during endoscopy screening and even in pathological assessment due to its anatomical location, morphology, and histological features. It has been shown that environmental factors especially the gut microbial composition play a key role in CRC pathogenesis. Thus, the preferential localization of serrated lesions in specific intestine areas suggest that niche-specific microbiota composition might intertwined with host genetic perturbations during the development of serrated lesions. Although serrated lesions and conventional adenomas are biologically different, most studies have focused on conventional adenomas, while the pathophysiology and role of microorganisms in the development of serrated lesions remain elusive. In this review, we discuss on the role of gut microbiota in the serrated neoplasia pathway of colorectal carcinogenesis and its specific clinical and molecular features, and summarize the potential mechanisms involved.</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Coronavirus interactions with the cellular autophagy machinery]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765746335922-1e565fd8-22ac-493f-ac96-4edbd36a3813/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/15548627.2020.1817280</link>
            <description><![CDATA[<p class="para" id="N65541">The COVID-19 pandemic, caused by the SARS-CoV-2 virus, is the most recent example of an emergent coronavirus that poses a significant threat to human health. Virus-host interactions play a major role in the viral life cycle and disease pathogenesis, and cellular pathways such as macroautophagy/autophagy prove to be either detrimental or beneficial to viral replication and maturation. Here, we describe the literature over the past twenty years describing autophagy-coronavirus interactions. There is evidence that many coronaviruses induce autophagy, although some of these viruses halt the progression of the pathway prior to autophagic degradation. In contrast, other coronaviruses usurp components of the autophagy pathway in a non-canonical fashion. Cataloging these virus-host interactions is crucial for understanding disease pathogenesis, especially with the global challenge of SARS-CoV-2 and COVID-19. With the recognition of autophagy inhibitors, including the controversial drug chloroquine, as possible treatments for COVID-19, understanding how autophagy affects the virus will be critical going forward.</p><p class="para" id="N65543"><b>Abbreviations</b>: 3-MA: 3-methyladenine (autophagy inhibitor); AKT/protein kinase B: AKT serine/threonine kinase; ATG: autophagy related; ATPase: adenosine triphosphatase; BMM: bone marrow macrophage; CGAS: cyclic GMP-AMP synthase; CHO: Chinese hamster ovary/cell line; CoV: coronaviruses; COVID-19: Coronavirus disease 2019; DMV: double-membrane vesicle; EAV: equine arteritis virus; EDEM1: ER degradation enhancing alpha-mannosidase like protein 1; ER: endoplasmic reticulum; ERAD: ER-associated degradation; GFP: green fluorescent protein; HCoV: human coronavirus; HIV: human immunodeficiency virus; HSV: herpes simplex virus; IBV: infectious bronchitis virus; IFN: interferon; LAMP1: lysosomal associated membrane protein 1; MAP1LC3/LC3: microtubule associated protein 1 light chain 3; MCoV: mouse coronavirus; MERS-CoV: Middle East respiratory syndrome coronavirus; MHV: mouse hepatitis virus; NBR1: NBR1 autophagy cargo receptor; CALCOCO2/NDP52: calcium binding and coiled-coil domain 2 (autophagy receptor that directs cargo to phagophores); nsp: non-structural protein; OS9: OS9 endoplasmic reticulum lectin; PEDV: porcine epidemic diarrhea virus; PtdIns3K: class III phosphatidylinositol 3-kinase; PLP: papain-like protease; pMEF: primary mouse embryonic fibroblasts; SARS-CoV: severe acute respiratory syndrome coronavirus; SKP2: S-phase kinase associated protein 2; SQSTM1: sequestosome 1; STING1: stimulator of interferon response cGAMP interactor 1; ULK1: unc-51 like autophagy activating kinase 1; Vps: vacuolar protein sorting</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Coronavirus interactions with the cellular autophagy machinery]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765746335922-1e565fd8-22ac-493f-ac96-4edbd36a3813/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1080/15548627.2020.1817280</link>
            <description><![CDATA[<p class="para" id="N65541">The COVID-19 pandemic, caused by the SARS-CoV-2 virus, is the most recent example of an emergent coronavirus that poses a significant threat to human health. Virus-host interactions play a major role in the viral life cycle and disease pathogenesis, and cellular pathways such as macroautophagy/autophagy prove to be either detrimental or beneficial to viral replication and maturation. Here, we describe the literature over the past twenty years describing autophagy-coronavirus interactions. There is evidence that many coronaviruses induce autophagy, although some of these viruses halt the progression of the pathway prior to autophagic degradation. In contrast, other coronaviruses usurp components of the autophagy pathway in a non-canonical fashion. Cataloging these virus-host interactions is crucial for understanding disease pathogenesis, especially with the global challenge of SARS-CoV-2 and COVID-19. With the recognition of autophagy inhibitors, including the controversial drug chloroquine, as possible treatments for COVID-19, understanding how autophagy affects the virus will be critical going forward.</p><p class="para" id="N65543"><b>Abbreviations</b>: 3-MA: 3-methyladenine (autophagy inhibitor); AKT/protein kinase B: AKT serine/threonine kinase; ATG: autophagy related; ATPase: adenosine triphosphatase; BMM: bone marrow macrophage; CGAS: cyclic GMP-AMP synthase; CHO: Chinese hamster ovary/cell line; CoV: coronaviruses; COVID-19: Coronavirus disease 2019; DMV: double-membrane vesicle; EAV: equine arteritis virus; EDEM1: ER degradation enhancing alpha-mannosidase like protein 1; ER: endoplasmic reticulum; ERAD: ER-associated degradation; GFP: green fluorescent protein; HCoV: human coronavirus; HIV: human immunodeficiency virus; HSV: herpes simplex virus; IBV: infectious bronchitis virus; IFN: interferon; LAMP1: lysosomal associated membrane protein 1; MAP1LC3/LC3: microtubule associated protein 1 light chain 3; MCoV: mouse coronavirus; MERS-CoV: Middle East respiratory syndrome coronavirus; MHV: mouse hepatitis virus; NBR1: NBR1 autophagy cargo receptor; CALCOCO2/NDP52: calcium binding and coiled-coil domain 2 (autophagy receptor that directs cargo to phagophores); nsp: non-structural protein; OS9: OS9 endoplasmic reticulum lectin; PEDV: porcine epidemic diarrhea virus; PtdIns3K: class III phosphatidylinositol 3-kinase; PLP: papain-like protease; pMEF: primary mouse embryonic fibroblasts; SARS-CoV: severe acute respiratory syndrome coronavirus; SKP2: S-phase kinase associated protein 2; SQSTM1: sequestosome 1; STING1: stimulator of interferon response cGAMP interactor 1; ULK1: unc-51 like autophagy activating kinase 1; Vps: vacuolar protein sorting</p>]]></description>
            <pubDate><![CDATA[]]></pubDate>
        </item><item>
            <title><![CDATA[Pathophysiology of ocular toxoplasmosis: Facts and open questions]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765740530642-27dbf7a6-fb5f-40e0-842a-9a4f3aeb4d15/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0008905</link>
            <description><![CDATA[<p class="para" id="N65539">Infections with the protozoan parasite <i>Toxoplasma gondii</i> are frequent, but one of its main consequences, ocular toxoplasmosis (OT), remains poorly understood. While its clinical description has recently attracted more attention and publications, the underlying pathophysiological mechanisms are only sparsely elucidated, which is partly due to the inherent difficulties to establish relevant animal models. Furthermore, the particularities of the ocular environment explain why the abundant knowledge on systemic toxoplasmosis cannot be just transferred to the ocular situation. However, studies undertaken in mouse models have revealed a central role of interferon gamma (IFNγ) and, more surprisingly, interleukin 17 (IL17), in ocular pathology and parasite control. These studies also show the importance of the genetic background of the infective <i>Toxoplasma</i> strain. Indeed, infections due to exotic strains show a completely different pathophysiology, which translates in a different clinical outcome. These elements should lead to more individualized therapy. Furthermore, the recent advance in understanding the immune response during OT paved the way to new research leads, involving immune pathways poorly studied in this particular setting, such as type I and type III interferons. In any case, deeper knowledge of the mechanisms of this pathology is needed to establish new, more targeted treatment schemes.</p>]]></description>
            <pubDate><![CDATA[2020-12-31T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[<i>Plasmodium knowlesi</i> infecting humans in Southeast Asia: What’s next?]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765740020148-94e60731-bd36-43ac-a398-d276fad74516/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0008900</link>
            <description><![CDATA[<p class="para" id="N65539"><i>Plasmodium knowlesi</i>, a simian malaria parasite, has been in the limelight since a large focus of human <i>P</i>. <i>knowlesi</i> infection was reported from Sarawak (Malaysian Borneo) in 2004. Although this infection is transmitted across Southeast Asia, the largest number of cases has been reported from Malaysia. The increasing number of knowlesi malaria cases has been attributed to the use of molecular tools for detection, but environmental changes including deforestation likely play a major role by increasing human exposure to vector mosquitoes, which coexist with the macaque host. In addition, with the reduction in human malaria transmission in Southeast Asia, it is possible that human populations are at a greater risk of <i>P</i>. <i>knowlesi</i> infection due to diminishing cross-species immunity. Furthermore, the possibility of increasing exposure of humans to other simian <i>Plasmodium</i> parasites such as <i>Plasmodium cynomolgi</i> and <i>Plasmodium inui</i> should not be ignored. We here review the current status of these parasites in humans, macaques, and mosquitoes to support necessary reorientation of malaria control and elimination in the affected areas.</p>]]></description>
            <pubDate><![CDATA[2020-12-31T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Zinc against COVID-19? Symptom surveillance and deficiency risk groups]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765740000448-178b2e54-6909-4e3c-8d8b-c83635b44ac2/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pntd.0008895</link>
            <description><![CDATA[<p class="para" id="N65539">A wide variety of symptoms is associated with Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection, and these symptoms can overlap with other conditions and diseases. Knowing the distribution of symptoms across diseases and individuals can support clinical actions on timelines shorter than those for drug and vaccine development. Here, we focus on zinc deficiency symptoms, symptom overlap with other conditions, as well as zinc effects on immune health and mechanistic zinc deficiency risk groups. There are well-studied beneficial effects of zinc on the immune system including a decreased susceptibility to and improved clinical outcomes for infectious pathogens including multiple viruses. Zinc is also an anti-inflammatory and anti-oxidative stress agent, relevant to some severe Coronavirus Disease 2019 (COVID-19) symptoms. Unfortunately, zinc deficiency is common worldwide and not exclusive to the developing world. Lifestyle choices and preexisting conditions alone can result in zinc deficiency, and we compile zinc risk groups based on a review of the literature. It is also important to distinguish chronic zinc deficiency from deficiency acquired upon viral infection and immune response and their different supplementation strategies. Zinc is being considered as prophylactic or adjunct therapy for COVID-19, with 12 clinical trials underway, highlighting the relevance of this trace element for global pandemics. Using the example of zinc, we show that there is a critical need for a deeper understanding of essential trace elements in human health, and the resulting deficiency symptoms and their overlap with other conditions. This knowledge will directly support human immune health for decreasing susceptibility, shortening illness duration, and preventing progression to severe cases in the current and future pandemics.</p>]]></description>
            <pubDate><![CDATA[2021-01-04T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[An ever-changing landscape in Roberts syndrome biology: Implications for macromolecular damage]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765739469387-2299f59f-391b-4d05-9b1b-fbb7ff5a64ea/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.pgen.1009219</link>
            <description><![CDATA[<p class="para" id="N65539">Roberts syndrome (RBS) is a rare developmental disorder that can include craniofacial abnormalities, limb malformations, missing digits, intellectual disabilities, stillbirth, and early mortality. The genetic basis for RBS is linked to autosomal recessive loss-of-function mutation of the establishment of cohesion (ESCO) 2 acetyltransferase. <i>ESCO2</i> is an essential gene that targets the DNA-binding cohesin complex. ESCO2 acetylates alternate subunits of cohesin to orchestrate vital cellular processes that include sister chromatid cohesion, chromosome condensation, transcription, and DNA repair. Although significant advances were made over the last 20 years in our understanding of ESCO2 and cohesin biology, the molecular etiology of RBS remains ambiguous. In this review, we highlight current models of RBS and reflect on data that suggests a novel role for macromolecular damage in the molecular etiology of RBS.</p>]]></description>
            <pubDate><![CDATA[2020-12-31T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The role of Neuropilin-1 in COVID-19]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765738831703-541ce65d-a292-483f-9b8b-86f8d0ce51fb/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1371/journal.ppat.1009153</link>
            <description><![CDATA[<p class="para" id="N65539">Neuropilin-1 (NRP-1), a member of a family of signaling proteins, was shown to serve as an entry factor and potentiate SARS Coronavirus 2 (SARS-CoV-2) infectivity in vitro. This cell surface receptor with its disseminated expression is important in angiogenesis, tumor progression, viral entry, axonal guidance, and immune function. NRP-1 is implicated in several aspects of a SARS-CoV-2 infection including possible spread through the olfactory bulb and into the central nervous system and increased NRP-1 RNA expression in lungs of severe Coronavirus Disease 2019 (COVID-19). Up-regulation of NRP-1 protein in diabetic kidney cells hint at its importance in a population at risk of severe COVID-19. Involvement of NRP-1 in immune function is compelling, given the role of an exaggerated immune response in disease severity and deaths due to COVID-19. NRP-1 has been suggested to be an immune checkpoint of T cell memory. It is unknown whether involvement and up-regulation of NRP-1 in COVID-19 may translate into disease outcome and long-term consequences, including possible immune dysfunction. It is prudent to further research NRP-1 and its possibility of serving as a therapeutic target in SARS-CoV-2 infections. We anticipate that widespread expression, abundance in the respiratory and olfactory epithelium, and the functionalities of NRP-1 factor into the multiple systemic effects of COVID-19 and challenges we face in management of disease and potential long-term sequelae.</p>]]></description>
            <pubDate><![CDATA[2021-01-04T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[Cytoskeletal organization of axons in vertebrates and invertebrates]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765609830236-47cb57ab-2de3-40c8-8fea-52e516ea1237/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1083/jcb.201912081</link>
            <description><![CDATA[<p class="para" id="N65540">Five decades of ultrastructural studies of axons are reviewed and reinterpreted on the basis of current mechanistic knowledge, revealing microtubule bundles as the essential common architectural element of vertebrate and invertebrate axons.</p><p class="para" id="N65539">The maintenance of axons for the lifetime of an organism requires an axonal cytoskeleton that is robust but also flexible to adapt to mechanical challenges and to support plastic changes of axon morphology. Furthermore, cytoskeletal organization has to adapt to axons of dramatically different dimensions, and to their compartment-specific requirements in the axon initial segment, in the axon shaft, at synapses or in growth cones. To understand how the cytoskeleton caters to these different demands, this review summarizes five decades of electron microscopic studies. It focuses on the organization of microtubules and neurofilaments in axon shafts in both vertebrate and invertebrate neurons, as well as the axon initial segments of vertebrate motor- and interneurons. Findings from these ultrastructural studies are being interpreted here on the basis of our contemporary molecular understanding. They strongly suggest that axon architecture in animals as diverse as arthropods and vertebrates is dependent on loosely cross-linked bundles of microtubules running all along axons, with only minor roles played by neurofilaments.</p>]]></description>
            <pubDate><![CDATA[2020-05-05T00:00]]></pubDate>
        </item><item>
            <title><![CDATA[The cell biology of inflammation: From common traits to remarkable immunological adaptations]]></title>
            <media:thumbnail url="https://storage.googleapis.com/nova-demo-unsecured-files/unsecured/content-1765608261606-16dbd9ef-899c-45ef-8480-acaf8dbdf476/cover.png"></media:thumbnail>
            <link>https://www.novareader.co/book/isbn/10.1083/jcb.202004003</link>
            <description><![CDATA[<p class="para" id="N65540">Weavers and Martin revisit Metchnikoff’s classic observations of inflammatory cell behavior in damaged tissues and update them with the latest cell biology studies.</p><p class="para" id="N65539">Tissue damage triggers a rapid and robust inflammatory response in order to clear and repair a wound. Remarkably, many of the cell biology features that underlie the ability of leukocytes to home in to sites of injury and to fight infection—most of which are topics of intensive current research—were originally observed in various weird and wonderful translucent organisms over a century ago by Elie Metchnikoff, the “father of innate immunity,” who is credited with discovering phagocytes in 1882. In this review, we use Metchnikoff’s seminal lectures as a starting point to discuss the tremendous variety of cell biology features that underpin the function of these multitasking immune cells. Some of these are shared by other cell types (including aspects of motility, membrane trafficking, cell division, and death), but others are more unique features of innate immune cells, enabling them to fulfill their specialized functions, such as encapsulation of invading pathogens, cell–cell fusion in response to foreign bodies, and their self-sacrifice as occurs during NETosis.</p>]]></description>
            <pubDate><![CDATA[2020-06-15T00:00]]></pubDate>
        </item>
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