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        <title>Nova Reader - Subject</title>
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        <copyright>Newgen KnowledgeWorks</copyright>
        <item>
            <title><![CDATA[Dynamic prioritization of COVID-19 vaccines when social distancing is limited for essential workers]]></title>
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            <link>https://www.novareader.co/book/isbn/10.1073/pnas.2025786118</link>
            <description><![CDATA[<p class="para" id="N65542">Vaccines are a key intervention to reduce the burden of the COVID-19 pandemic. However, vaccine supply and administration capacity will initially be limited. Due to these constraints, it is critical to understand how vaccine deployment can be targeted to minimize the overall burden of disease. In this paper, we solve for optimal dynamic strategies to allocate a limited supply of vaccines over a population differentiated by age and essential worker status that minimizes the number of total deaths, years of life lost, or infections. We find that older essential workers are typically targeted first. However, depending on the objective and alternative model scenarios considered, younger essential workers may be prioritized to control spread or seniors to directly control mortality.</p><p class="para" id="N65539">COVID-19 vaccines have been authorized in multiple countries, and more are under rapid development. Careful design of a vaccine prioritization strategy across sociodemographic groups is a crucial public policy challenge given that 1) vaccine supply will be constrained for the first several months of the vaccination campaign, 2) there are stark differences in transmission and severity of impacts from severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) across groups, and 3) SARS-CoV-2 differs markedly from previous pandemic viruses. We assess the optimal allocation of a limited vaccine supply in the United States across groups differentiated by age and essential worker status, which constrains opportunities for social distancing. We model transmission dynamics using a compartmental model parameterized to capture current understanding of the epidemiological characteristics of COVID-19, including key sources of group heterogeneity (susceptibility, severity, and contact rates). We investigate three alternative policy objectives (minimizing infections, years of life lost, or deaths) and model a dynamic strategy that evolves with the population epidemiological status. We find that this temporal flexibility contributes substantially to public health goals. Older essential workers are typically targeted first. However, depending on the objective, younger essential workers are prioritized to control spread or seniors to directly control mortality. When the objective is minimizing deaths, relative to an untargeted approach, prioritization averts deaths on a range between 20,000 (when nonpharmaceutical interventions are strong) and 300,000 (when these interventions are weak). We illustrate how optimal prioritization is sensitive to several factors, most notably, vaccine effectiveness and supply, rate of transmission, and the magnitude of initial infections.</p>]]></description>
            <pubDate><![CDATA[2021-04-02T00:00]]></pubDate>
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            <title><![CDATA[Ranking the risk of animal-to-human spillover for newly discovered viruses]]></title>
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            <link>https://www.novareader.co/book/isbn/10.1073/pnas.2002324118</link>
            <description><![CDATA[<p class="para" id="N65542">The recent emergence and spread of zoonotic viruses, including Ebola virus and severe acute respiratory syndrome coronavirus 2, demonstrate that animal-sourced viruses are a very real threat to global public health. Virus discovery efforts have detected hundreds of new animal viruses with unknown zoonotic risk. We developed an open-source risk assessment to systematically evaluate novel wildlife-origin viruses in terms of their zoonotic spillover and spread potential. Our tool will help scientists and governments assess and communicate risk, informing national disease prioritization, prevention, and control actions. The resulting watchlist of potential pathogens will identify targets for new virus countermeasure initiatives, which can reduce the economic and health impacts of emerging diseases.</p><p class="para" id="N65539">The death toll and economic loss resulting from the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic are stark reminders that we are vulnerable to zoonotic viral threats. Strategies are needed to identify and characterize animal viruses that pose the greatest risk of spillover and spread in humans and inform public health interventions. Using expert opinion and scientific evidence, we identified host, viral, and environmental risk factors contributing to zoonotic virus spillover and spread in humans. We then developed a risk ranking framework and interactive web tool, SpillOver, that estimates a risk score for wildlife-origin viruses, creating a comparative risk assessment of viruses with uncharacterized zoonotic spillover potential alongside those already known to be zoonotic. Using data from testing 509,721 samples from 74,635 animals as part of a virus discovery project and public records of virus detections around the world, we ranked the spillover potential of 887 wildlife viruses. Validating the risk assessment, the top 12 were known zoonotic viruses, including SARS-CoV-2. Several newly detected wildlife viruses ranked higher than known zoonotic viruses. Using a scientifically informed process, we capitalized on the recent wealth of virus discovery data to systematically identify and prioritize targets for investigation. The publicly accessible SpillOver platform can be used by policy makers and health scientists to inform research and public health interventions for prevention and rapid control of disease outbreaks. SpillOver is a living, interactive database that can be refined over time to continue to improve the quality and public availability of information on viral threats to human health.</p>]]></description>
            <pubDate><![CDATA[2021-04-05T00:00]]></pubDate>
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            <title><![CDATA[Acetogenic bacteria utilize light-driven electrons as an energy source for autotrophic growth]]></title>
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            <link>https://www.novareader.co/book/isbn/10.1073/pnas.2020552118</link>
            <description><![CDATA[<p class="para" id="N65542">To develop an efficient artificial photosynthesis system using acetogen-nanoparticle hybrids, the efficiency of the electron–hole pair generation of nanoparticles must be enhanced to demonstrate extracellular electron utilization by the acetogen. Here we verified that <i>Clostridium autoethanogenum</i>, an industrially relevant acetogen, could use electrons generated from size- and structure-controlled chemically synthesized cadmium sulfide nanoparticles displayed on the cell surface under light-exposure conditions. In addition, transcriptomic analysis showed that the electrons generated from nanoparticles were largely transported to the intracellular matrix via the metal ion or flavin-binding proteins. These results illustrate the potential to increase the CO<sub>2</sub>-fixing efficiency of nanoparticle-based artificial photosynthesis by engineering cellular processes related to electron transfer generated from the cathode.</p><p class="para" id="N65539">Acetogenic bacteria use cellular redox energy to convert CO<sub>2</sub> to acetate using the Wood–Ljungdahl (WL) pathway. Such redox energy can be derived from electrons generated from H<sub>2</sub> as well as from inorganic materials, such as photoresponsive semiconductors. We have developed a nanoparticle-microbe hybrid system in which chemically synthesized cadmium sulfide nanoparticles (CdS-NPs) are displayed on the cell surface of the industrial acetogen <i>Clostridium autoethanogenum</i>. The hybrid system converts CO<sub>2</sub> into acetate without the need for additional energy sources, such as H<sub>2</sub>, and uses only light-induced electrons from CdS-NPs. To elucidate the underlying mechanism by which <i>C. autoethanogenum</i> uses electrons generated from external energy sources to reduce CO<sub>2</sub>, we performed transcriptional analysis. Our results indicate that genes encoding the metal ion or flavin-binding proteins were highly up-regulated under CdS-driven autotrophic conditions along with the activation of genes associated with the WL pathway and energy conservation system. Furthermore, the addition of these cofactors increased the CO<sub>2</sub> fixation rate under light-exposure conditions. Our results demonstrate the potential to improve the efficiency of artificial photosynthesis systems based on acetogenic bacteria integrated with photoresponsive nanoparticles.</p>]]></description>
            <pubDate><![CDATA[2021-02-22T00:00]]></pubDate>
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            <title><![CDATA[Inhibitors of cullin-RING E3 ubiquitin ligase 4 with antitumor potential]]></title>
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            <link>https://www.novareader.co/book/isbn/10.1073/pnas.2007328118</link>
            <description><![CDATA[<p class="para" id="N65542">Cullin-RING E3 ubiquitin ligases (CRLs) direct protein degradation to impact a myriad of physiological and pathological processes including cancer. This work reports the small-molecule compounds 33-11 and KH-4-43 as inhibitors of E3 CRL4 with anticancer potential. These compounds have provided an opportunity for developing tool compounds to address mechanistic and phenotypic questions about CRL4 in biochemical, cell-based, and animal studies. The results of correlation studies between cullin4 protein level and the compounds’ cytotoxic response as well as cullin4 depletion experiments suggest a role for low E3 abundance in sensitizing tumor cells for apoptosis. Collectively, the 33-11/KH-4-43–based CRL4 inhibitors may provide new exploitable therapeutic opportunities to target a subset of tumor lines characterized by low CUL4 expression.</p><p class="para" id="N65539">Cullin-RING (really intersting new gene) E3 ubiquitin ligases (CRLs) are the largest E3 family and direct numerous protein substrates for proteasomal degradation, thereby impacting a myriad of physiological and pathological processes including cancer. To date, there are no reported small-molecule inhibitors of the catalytic activity of CRLs. Here, we describe high-throughput screening and medicinal chemistry optimization efforts that led to the identification of two compounds, 33-11 and KH-4-43, which inhibit E3 CRL4 and exhibit antitumor potential. These compounds bind to CRL4’s core catalytic complex, inhibit CRL4-mediated ubiquitination, and cause stabilization of CRL4’s substrate CDT1 in cells. Treatment with 33-11 or KH-4-43 in a panel of 36 tumor cell lines revealed cytotoxicity. The antitumor activity was validated by the ability of the compounds to suppress the growth of human tumor xenografts in mice. Mechanistically, the compounds’ cytotoxicity was linked to aberrant accumulation of CDT1 that is known to trigger apoptosis. Moreover, a subset of tumor cells was found to express cullin4 proteins at levels as much as 70-fold lower than those in other tumor lines. The low-cullin4–expressing tumor cells appeared to exhibit increased sensitivity to 33-11/KH-4-43, raising a provocative hypothesis for the role of low E3 abundance as a cancer vulnerability.</p>]]></description>
            <pubDate><![CDATA[2021-02-18T00:00]]></pubDate>
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